Detailed Information for Phage RetrieverFever |
Discovery Information |
Isolation Host | Streptomyces scabiei RL-34 |
Found By | Quynh Pham |
Year Found | 2020 |
Location Found | Clarksburg, MD United States |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 39.23 N, 77.24 W Map |
Discovery Notes | Collected 8/10/20, 9:35 AM, 80 °F, 75% humidity Soil under grass and brush under Eastern red cedar tree, ~2.25" deep. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 14, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2778 |
Genome length (bp) | 46175 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 253 bp |
GC Content | 60.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BF |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Maryland, Baltimore County |
Annotation Status | Being Annotated (Expected completion by 5/1/2021) |
Morphotype | Podoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
1.62e9 pfu/mL |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |