| Detailed Information for Phage Madi |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Desiree, Maggie, Ananya, Izabella |
| Year Found | 2020 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.441947 N, 79.952079 W Map |
| Discovery Notes | Collected at 4:20 pm August 24, 2020
Next to the sidewalk by the Mary Schenley Memorial Fountain
Weather: It was bright and sunny outside |
| Naming Notes | The name originates from the first letter of the first name of each member in the lab group
Maggie Yang
Ananya Shivakumar
Desiree Amewotho
Izabella Zadrozny |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 21, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 337 |
| Genome length (bp) | 66439 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DG |
| Subcluster | DG1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Clear plaques that are approximately 1 mm in diameter |
| Number of Genes | 95 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ171372 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
125 |
| Pitt Freezer Box Grid# |
G3 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
