| Detailed Information for Phage MakoManhole |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Christopher Huang |
| Year Found | 2023 |
| Location Found | Davie, FL United States |
| Finding Institution | Nova Southeastern University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 26.07439 N, 80.24096 W Map |
| Discovery Notes | The soil sample was collected at a sunny day at 85 degrees Fahrenheit. It rained two days prior. The soil was collected between a road and a small river near a manhole cover. The soil collected contained some vegetation. |
| Naming Notes | Mako is the name of a building on campus, and the phage was collected near a manhole. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 644 |
| Genome length (bp) | 61592 |
| Character of genome ends | Circularly Permuted |
| GC Content | 68.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DR |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Nova Southeastern University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques were relatively clear. Some of them seemed to vary in size. |
| Number of Genes | 83 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ184807 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
184 |
| Pitt Freezer Box Grid# |
G6 |
| Available Files |
| GenBank File for Phamerator | Download |