The Actinobacteriophage Database

Gordonia phage NHagos

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Detailed Information for Phage NHagos
Discovery Information
Isolation Host	Gordonia rubripertincta NRRL B-16540
Former names	Nia52816
Found By	Michelle Moriarty
Year Found	2018
Location Found	Las Vegas, NV USA
Finding Institution	College of Southern Nevada
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	30°C
GPS Coordinates	36.11659 N, 115.17107 W Map
Discovery Notes	Soil collected in a Flamingo and aquatic bird habitat.
Naming Notes	The phage is named after the daughter of the person who discovered it.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 3, 2019
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina
Sequencer Used	Illumina MiSeq
Read Type	Single-end reads
Read Length	150 bp
Approximate Shotgun Coverage	1672
Genome length (bp)	59580
Character of genome ends	Circularly Permuted
GC Content	68.2%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	DR
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View AksarBAT AnarQue AnClar Axumite BiggityBass BobRoss2024 CaiB CharlottesWeb CloverMinnie Coldpizza Evaa Fresco Ligma LittleMunchkin MakoManhole Mariokart MossRose NHagos Shatter Sisko Sour Wooper Yago84 Yeshua
Annotating Institution	College of Southern Nevada
Annotation Status	In GenBank
Plaque Notes	Plaques are clear and round, ranging from small to medium.
Morphotype	Siphoviridae
Number of Genes	82
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View NHagos_1 (ParB-like nuclease domain protein) NHagos_2 NHagos_3 NHagos_4 (terminase) NHagos_5 NHagos_6 (RuvC-like resolvase) NHagos_7 NHagos_8 (portal protein) NHagos_9 (capsid maturation protease and MuF-like fusion protein) NHagos_10 NHagos_11 (major capsid hexamer protein) NHagos_12 (major capsid pentamer protein) NHagos_13 NHagos_14 NHagos_15 NHagos_16 NHagos_17 NHagos_18 (major tail protein) NHagos_19 (head-to-tail adaptor) NHagos_20 NHagos_21 (tail assembly chaperone) NHagos_22 (tail assembly chaperone) NHagos_23 NHagos_24 (tape measure protein) NHagos_25 (minor tail protein) NHagos_26 (minor tail protein) NHagos_27 (minor tail protein) NHagos_28 NHagos_29 NHagos_30 NHagos_31 NHagos_32 NHagos_33 NHagos_34 NHagos_35 NHagos_36 NHagos_37 NHagos_38 (LamD-like protein) NHagos_39 (LamD-like protein) NHagos_40 NHagos_41 (lysin A, L-Ala-D-Glu peptidase domain) NHagos_42 (lysin A, glycosyl hydrolase domain) NHagos_43 (lysin B) NHagos_44 NHagos_45 (exonuclease) NHagos_46 NHagos_47 (DNA helicase) NHagos_48 NHagos_49 NHagos_50 (DNA primase/helicase) NHagos_51 NHagos_52 (DNA polymerase I) NHagos_53 NHagos_54 NHagos_55 NHagos_56 NHagos_57 NHagos_58 NHagos_59 (ribbon-helix-helix DNA binding domain protein) NHagos_60 NHagos_61 NHagos_62 NHagos_63 NHagos_64 NHagos_65 NHagos_66 NHagos_67 NHagos_68 NHagos_69 NHagos_70 (HNH endonuclease) NHagos_71 NHagos_72 NHagos_73 NHagos_74 (HNH endonuclease) NHagos_75 NHagos_76 NHagos_77 NHagos_78 NHagos_79 NHagos_80 NHagos_81 NHagos_82
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MN369758
Refseq Number	None yet
Published in Paper	Harrington et al 2020, Microbiology Resource Announcements: Genome Sequences of Gordonia rubripertincta Bacteriophages Jellybones and NHagos
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	80
Pitt Freezer Box Grid#	H4
Available Files
EM Picture	Download
GenBank File for Phamerator	Download

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