Detailed Information for Phage Nightmare |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Morgan Sperratore |
Year Found | 2015 |
Location Found | Chester, PA USA |
Finding Institution | Cabrini University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 23°C |
GPS Coordinates | 39.86284 N, 75.371462 W Map |
Discovery Notes | Soil was dry and in a shady spot. |
Naming Notes | Soil sample was taken from my grandparent's house and my grandmother had a nightmare. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 26, 2016 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 160 |
Genome length (bp) | 58839 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGCCT |
End Determination Notes | CGCCGGCCT |
GC Content | 49.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AU |
Subcluster | AU1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Nightmare has medium size, clear plaques. |
Morphotype | Siphoviridae |
Number of Genes | 92 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MF140423 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Designator |
Cabrini College |
SEA Lysate Titer |
7.3 X 10^9 pfu/ml |
Date of SEA Lysate Titering |
Aug 13, 2015 |
Pitt Freezer Box# |
149 |
Pitt Freezer Box Grid# |
C12 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |