Arthrobacter phage Ollypop
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Detailed Information for Phage Ollypop
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByReagan Riggins
Year Found2024
Location FoundAtlanta, GA United States
Finding InstitutionSpelman College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.746111 N, 84.4125 W Map
Discovery NotesThe soil sample was collected from the area near the side door of Spelman College's Cosby Auditorium. The soil was slightly moist at the time of collection, suggesting recent exposure to humidity or light precipitation.
Naming NotesWhen I first saw a picture of my phage, the very first thought that came to mind was how much it resembled a lollipop. Inspired by this observation, I decided to get creative and named it "Ollypop."
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage1072
Genome length (bp)70074
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length606 bp
GC Content65.6%
Sequencing NotesThis sample was sequenced as part of a DOGEMS (deliberately mixed) sample.
Fasta file available?Yes: Download fasta file
Characterization
ClusterAP
SubclusterAP2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionSpelman College
Annotation StatusIn GenBank
Plaque NotesThe plaques appeared as clear, indicating successful lysis of the bacterial host cells by the phages.
MorphotypeSiphoviridae
Number of Genes119
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Ollypop_1

Ollypop_2

Ollypop_3

Ollypop_4

Ollypop_5

Ollypop_6

Ollypop_7

Ollypop_8

Ollypop_9

Ollypop_10

Ollypop_11

Ollypop_12

Ollypop_13
(ParB N-terminal-like domain)

Ollypop_14

Ollypop_15

Ollypop_16
(helix-turn-helix DNA binding domain)

Ollypop_17
(ribbon-helix-helix DNA binding domain)

Ollypop_18
(terminase)

Ollypop_19

Ollypop_20
(portal protein)

Ollypop_21

Ollypop_22
(capsid maturation protease)

Ollypop_23

Ollypop_24
(major capsid hexamer protein)

Ollypop_25

Ollypop_26

Ollypop_27
(tail tube)

Ollypop_28
(endolysin)

Ollypop_29
(head-to-tail adaptor)

Ollypop_30

Ollypop_31

Ollypop_32
(tail assembly chaperone)

Ollypop_33
(tail assembly chaperone)

Ollypop_34
(tape measure protein)

Ollypop_35
(Dit)

Ollypop_36
(baseplate hub)

Ollypop_37

Ollypop_38
(minor tail protein)

Ollypop_39
(minor tail protein)

Ollypop_40
(minor tail protein)

Ollypop_41

Ollypop_42

Ollypop_43

Ollypop_44

Ollypop_45

Ollypop_46

Ollypop_47
(minor tail protein)

Ollypop_48
(RusA-like resolvase)

Ollypop_49

Ollypop_50
(ribonucleotide reductase)

Ollypop_51

Ollypop_52
(helix-turn-helix DNA binding domain)

Ollypop_53

Ollypop_54

Ollypop_55

Ollypop_56

Ollypop_57

Ollypop_58

Ollypop_59
(helix-turn-helix DNA binding domain)

Ollypop_60

Ollypop_61

Ollypop_62

Ollypop_63

Ollypop_64

Ollypop_65

Ollypop_66

Ollypop_67

Ollypop_68

Ollypop_69

Ollypop_70

Ollypop_71

Ollypop_72

Ollypop_73

Ollypop_74
(Cas4 exonuclease)

Ollypop_75
(DNA repair protein)

Ollypop_76

Ollypop_77
(HNH endonuclease)

Ollypop_78
(MazG-like nucleotide pyrophosphohydrolase)

Ollypop_79

Ollypop_80
(HNH endonuclease)

Ollypop_81

Ollypop_82

Ollypop_83
(HNH endonuclease)

Ollypop_84
(DNA binding protein)

Ollypop_85

Ollypop_86

Ollypop_87

Ollypop_88
(DNA primase/helicase)

Ollypop_89
(helix-turn-helix DNA binding domain)

Ollypop_90

Ollypop_91
(SSB protein)

Ollypop_92

Ollypop_93
(HNH endonuclease)

Ollypop_94

Ollypop_95

Ollypop_96

Ollypop_97

Ollypop_98

Ollypop_99

Ollypop_100

Ollypop_101

Ollypop_102

Ollypop_103

Ollypop_104

Ollypop_105

Ollypop_106

Ollypop_107

Ollypop_108

Ollypop_109

Ollypop_110

Ollypop_111

Ollypop_112

Ollypop_113

Ollypop_114

Ollypop_115

Ollypop_116

Ollypop_117

Ollypop_118

Ollypop_119

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876916
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 216
Pitt Freezer Box Grid# A12
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload