Mycobacterium phage PLot
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| Detailed Information for Phage PLot | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | R. Dnandapani |
| Year Found | 2003 |
| Location Found | Pittsburgh , PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.44422 N, 79.953218 W Map |
| Naming Notes | This phage was named for its location, an adjacent parking lot to the Hatfull lab. Currently they are building a 8 story building where this parking lot used to be. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2006 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Sanger Sequencing |
| Genome length (bp) | 64787 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | D |
| Subcluster | D1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 89 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPLot_1 PLot_2 PLot_3 PLot_4 PLot_5 PLot_6 PLot_7 PLot_8 PLot_9 PLot_10 PLot_11 PLot_12 PLot_13 PLot_14 PLot_15 PLot_16 PLot_17 PLot_18 PLot_19 PLot_20 PLot_21 PLot_22 PLot_23 PLot_24 PLot_25 PLot_26 PLot_27 PLot_28 PLot_29 PLot_30 PLot_31 PLot_32 PLot_33 PLot_34 PLot_35 PLot_36 PLot_37 PLot_38 PLot_39 PLot_40 PLot_41 PLot_42 PLot_43 PLot_44 PLot_45 PLot_46 PLot_47 PLot_48 PLot_49 PLot_50 PLot_51 PLot_52 PLot_53 PLot_54 PLot_55 PLot_56 PLot_57 PLot_58 PLot_59 PLot_60 PLot_61 PLot_62 PLot_63 PLot_64 PLot_65 PLot_66 PLot_67 PLot_68 PLot_69 PLot_70 PLot_71 PLot_72 PLot_73 PLot_74 PLot_75 PLot_76 PLot_77 PLot_78 PLot_79 PLot_80 PLot_81 PLot_82 PLot_83 PLot_84 PLot_85 PLot_86 PLot_87 PLot_88 PLot_89 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | DQ398051 |
| Refseq Number | NC_008200 |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 2 |
| Pitt Freezer Box Grid# | G2 |
| Available Files | |
| Plaque Picture | Download |
| Virtual Digest Picture | Download |
| EM Picture | Download |
