| Detailed Information for Phage Phaby |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Stella MacConnell & Tania Wells |
| Year Found | 2023 |
| Location Found | Poughkeepsie, NY United States |
| Finding Institution | Marist University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 41.7 N, 73.9 W Map |
| Discovery Notes | In the edge of a field which wasn't currently in use at Poughkeepsie Farm Project, from just below the surface with a lot of decaying organic material. Soil was slightly damp. |
| Naming Notes | Phaby is a mixture of the word phage and baby because the phage is our baby. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 239 |
| Genome length (bp) | 57282 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGCCC |
| GC Content | 50.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AU |
| Subcluster | AU2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Marist University |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques were small and spread out (minimal amount). |
| Morphotype | Siphoviridae |
| Number of Genes | 92 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ201082 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
6.7x10^9 |
| Pitt Freezer Box# |
183 |
| Pitt Freezer Box Grid# |
C10 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
