Detailed Information for Phage Phredrick |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Ashley Kitch, Juli Smith, Nat Rose, Abbey Harris |
Year Found | 2022 |
Location Found | CHANDLER, IN United States |
Finding Institution | University of Evansville |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 20°C |
GPS Coordinates | 38.041711 N, 87.368065 W Map |
Discovery Notes | This particular phage was found in my garden, in the soil right about the brown clay layer. |
Naming Notes | a play on words "phage" begins with the "ph" sound and "phredrick" would be a play on that same naming system. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 770 |
Genome length (bp) | 128873 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 765 bp |
GC Content | 47.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BK |
Subcluster | BK1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Evansville |
Annotation Status | In GenBank |
Plaque Notes | plaques for this phage have continually had both smaller sized and medium-sized plaques, after 3 rounds of purification, this was determined to just be a characteristic of the phage itself |
Number of Genes | 238 |
Number of tRNAs | 35 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR553903 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
160 |
Pitt Freezer Box Grid# |
D8 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |