| Detailed Information for Phage Prager | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Jackelyn Prager |
| Year Found | 2023 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 40.444638 N, 79.952252 W Map |
| Discovery Notes | This phage was isolated from a soil sample collected by Jackie Prager on 11/8/2023. Phage isolation and purification were performed by Deborah Jacobs-Sera. Jackie, a producer at CNN, was here to document phage hunting for a CNN International piece. |
| Naming Notes | Jackie named it after herself! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 10485 |
| Genome length (bp) | 64462 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | D |
| Subcluster | D1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | The plaues are tiny, ~2mm, and realtively clear. |
| Morphotype | Siphoviridae |
| Number of Genes | 88 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPrager_1 Prager_2 Prager_3 Prager_4 Prager_5 Prager_6 Prager_7 Prager_8 Prager_9 Prager_10 Prager_11 Prager_12 Prager_13 Prager_14 Prager_15 Prager_16 Prager_17 Prager_18 Prager_19 Prager_20 Prager_21 Prager_22 Prager_23 Prager_24 Prager_25 Prager_26 Prager_27 Prager_28 Prager_29 Prager_30 Prager_31 Prager_32 Prager_33 Prager_34 Prager_35 Prager_36 Prager_37 Prager_38 Prager_39 Prager_40 Prager_41 Prager_42 Prager_43 Prager_44 Prager_45 Prager_46 Prager_47 Prager_48 Prager_49 Prager_50 Prager_51 Prager_52 Prager_53 Prager_54 Prager_55 Prager_56 Prager_57 Prager_58 Prager_59 Prager_60 Prager_61 Prager_62 Prager_63 Prager_64 Prager_65 Prager_66 Prager_67 Prager_68 Prager_69 Prager_70 Prager_71 Prager_72 Prager_73 Prager_74 Prager_75 Prager_76 Prager_77 Prager_78 Prager_79 Prager_80 Prager_81 Prager_82 Prager_83 Prager_84 Prager_85 Prager_86 Prager_87 Prager_88 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ868991 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
