Arthrobacter phage Schism
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Detailed Information for Phage Schism
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByLayla Baldwin
Year Found2024
Location FoundDenham Springs, LA United States America
Finding InstitutionSoutheastern Louisiana University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates30.588862 N, 90.93868 W Map
Discovery Notes...
Naming NotesNamed after one of my favorite songs.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage2372
Genome length (bp)43066
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTCCGCCGCGTGA
GC Content64.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFF
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionSoutheastern Louisiana University
Annotation StatusIn GenBank
Number of Genes69
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Schism_1

Schism_2

Schism_3 — tRNA
(tRNA-Ser(gct))

Schism_4
(helix-turn-helix DNA binding domain)

Schism_5
(terminase, small subunit)

Schism_6
(terminase, large subunit)

Schism_7
(portal protein)

Schism_8
(capsid maturation protease)

Schism_9
(scaffolding protein)

Schism_10
(major capsid protein)

Schism_11

Schism_12
(head-to-tail adaptor)

Schism_13
(head-to-tail adaptor)

Schism_14

Schism_15
(tail terminator)

Schism_16
(major tail protein)

Schism_17

Schism_18
(tail assembly chaperone)

Schism_19
(tail assembly chaperone)

Schism_20
(tape measure protein)

Schism_21
(minor tail protein)

Schism_22
(minor tail protein)

Schism_23

Schism_24

Schism_25
(endolysin)

Schism_26

Schism_27
(minor tail protein)

Schism_28
(minor tail protein)

Schism_29

Schism_30

Schism_31

Schism_32
(esterase)

Schism_33

Schism_34
(esterase)

Schism_35

Schism_36

Schism_37
(helix-turn-helix DNA binding domain)

Schism_38
(tyrosine integrase)

Schism_39
(helix-turn-helix DNA binding domain)

Schism_40 — tRNA
(tRNA-Arg(tct))

Schism_41
(tyrosine integrase)

Schism_42

Schism_43

Schism_44

Schism_45
(helix-turn-helix DNA binding domain)

Schism_46
(helix-turn-helix DNA binding domain, MerR-like)

Schism_47

Schism_48

Schism_49

Schism_50

Schism_51
(ParB N-terminal-like domain)

Schism_52

Schism_53
(helix-turn-helix DNA binding domain)

Schism_54

Schism_55
(helix-turn-helix DNA binding domain)

Schism_56
(DNA polymerase III sliding clamp (Beta))

Schism_57

Schism_58

Schism_59

Schism_60

Schism_61

Schism_62

Schism_63

Schism_64

Schism_65

Schism_66
(HNH endonuclease)

Schism_67
(VRR-Nuc domain protein)

Schism_68

Schism_69

Schism_70

Schism_71
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX307259
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload