Mycobacterium phage Shida
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Detailed Information for Phage Shida
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJustin Moore
Year Found2018
Location FoundLongview, TX USA
Finding InstitutionLeTourneau University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature26°C
GPS Coordinates32.4634 N, 94.7265 W Map
Discovery NotesFound the soil with my professor over by our baseball fields. We felt that the location would produce enriched soil samples.
Naming NotesThought about how the class was throughout the year personally. The name means stressful in Swahili.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage592
Genome length (bp)71343
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceGTGT
GC Content65.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterO
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionLeTourneau University
Annotation StatusOverdue (Expected completion by 5/15/2020)
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 85
Pitt Freezer Box Grid# D1
Available Files
EM PictureDownload