Gordonia phage Sour
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Detailed Information for Phage Sour
Discovery Information
Isolation HostGordonia terrae NRRL B-16283
Found ByMatthew Montgomery
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.441602 N, 79.95028 W Map
Naming NotesI was eating a particularly sour granny smith apple during the naming of this phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 8, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage249
Genome length (bp)61670
Character of genome endsCircularly Permuted
GC Content68.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Number of Genes79
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Sour_1
(ParB-like nuclease domain protein)

Sour_2
(queuine tRNA-ribosyltransferase)

Sour_3
(PreQo pathway QueC-like protein)

Sour_4
(QueD-like queosine biosynthesis protein)

Sour_5

Sour_6
(QueE-like queosine biosynthesis protein)

Sour_7
(GTP cyclohydrolase I)

Sour_8
(terminase)

Sour_9
(RuvC-like resolvase)

Sour_10

Sour_11
(portal protein)

Sour_12
(capsid maturation protease)

Sour_13

Sour_14
(major capsid hexamer protein)

Sour_15
(major capsid pentamer protein)

Sour_16

Sour_17
(holin)

Sour_18

Sour_19

Sour_20

Sour_21
(major tail protein)

Sour_22
(minor tail protein)

Sour_23
(head-to-tail adaptor)

Sour_24

Sour_25

Sour_26

Sour_27

Sour_28
(tape measure protein)

Sour_29
(minor tail protein)

Sour_30
(minor tail protein)

Sour_31
(minor tail protein)

Sour_32

Sour_33

Sour_34
(HNH endonuclease)

Sour_35

Sour_36

Sour_37

Sour_38

Sour_39

Sour_40
(minor tail protein)

Sour_41

Sour_42

Sour_43
(DNA binding protein)

Sour_44
(helix-turn-helix DNA binding protein)

Sour_45

Sour_46
(lysin A)

Sour_47
(lysin B)

Sour_48

Sour_49
(exonuclease)

Sour_50
(DNA helicase)

Sour_51
(helix-turn-helix DNA binding protein)

Sour_52
(RepA-like helicase)

Sour_53
(DNA polymerase I)

Sour_54

Sour_55

Sour_56

Sour_57

Sour_58
(polynucleotide kinase)

Sour_59

Sour_60

Sour_61

Sour_62
(ribbon-helix-helix DNA binding domain protein)

Sour_63

Sour_64
(helix-turn-helix DNA binding protein)

Sour_65

Sour_66

Sour_67

Sour_68
(DNA binding protein)

Sour_69

Sour_70
(DNA binding protein)

Sour_71
(HicA-like toxin)

Sour_72

Sour_73

Sour_74

Sour_75

Sour_76
(lipoprotein)

Sour_77

Sour_78

Sour_79

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH153810
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 96
Pitt Freezer Box Grid# F2
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload