Microbacterium phage SuMoo
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Detailed Information for Phage SuMoo
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByMohamed Sharaf / Esraa Sharaf
Year Found2023
Location FoundArabi, LA USA
Finding InstitutionXavier University of Louisiana
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates29.95924 N, 89.99122 W Map
Discovery NotesFound on surface grass and approximately 1 in deep soil.
Naming NotesName of phage is a combination of group members nicknames. Esraa's nickname is SuSu and Mohamed's nickname is MooMoo. Combined it's SuMoo.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 2, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1142
Genome length (bp)49192
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGAGAGGCAT
GC Content69.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEH
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionXavier University of Louisiana
Annotation StatusIn GenBank
Plaque NotesApprox. 1mm round, cloudy plaque
MorphotypeSiphoviridae
Number of Genes81
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

SuMoo_1
(terminase, small subunit)

SuMoo_2
(terminase, large subunit)

SuMoo_3
(portal protein)

SuMoo_4

SuMoo_5
(scaffolding protein)

SuMoo_6
(major capsid protein)

SuMoo_7
(head-to-tail adaptor)

SuMoo_8
(head-to-tail stopper)

SuMoo_9

SuMoo_10
(tail terminator)

SuMoo_11
(major tail protein)

SuMoo_12
(tail assembly chaperone)

SuMoo_13
(tail assembly chaperone)

SuMoo_14
(tape measure protein)

SuMoo_15
(minor tail protein)

SuMoo_16
(minor tail protein)

SuMoo_17

SuMoo_18
(minor tail protein)

SuMoo_19
(minor tail protein)

SuMoo_20
(endolysin)

SuMoo_21

SuMoo_22
(holin)

SuMoo_23

SuMoo_24
(deoxynucleoside monophosphate kinase)

SuMoo_25

SuMoo_26
(exonuclease)

SuMoo_27

SuMoo_28
(nucleoside deoxyribosyltransferase)

SuMoo_29

SuMoo_30

SuMoo_31
(LAGLIDADG endonuclease)

SuMoo_32

SuMoo_33

SuMoo_34

SuMoo_35

SuMoo_36

SuMoo_37

SuMoo_38

SuMoo_39
(RNA ligase)

SuMoo_40

SuMoo_41

SuMoo_42
(recombination directionality factor)

SuMoo_43

SuMoo_44
(NrdH-like glutaredoxin)

SuMoo_45

SuMoo_46
(Holiday junction resolvase)

SuMoo_47
(DNA primase/helicase)

SuMoo_48

SuMoo_49

SuMoo_50
(DNA polymerase)

SuMoo_51

SuMoo_52

SuMoo_53
(DNA binding protein)

SuMoo_54
(SprT-like protease)

SuMoo_55

SuMoo_56

SuMoo_57

SuMoo_58

SuMoo_59

SuMoo_60

SuMoo_61

SuMoo_62

SuMoo_63

SuMoo_64
(serine integrase)

SuMoo_65

SuMoo_66

SuMoo_67

SuMoo_68

SuMoo_69

SuMoo_70

SuMoo_71

SuMoo_72

SuMoo_73

SuMoo_74
(metallophosphatase)

SuMoo_75

SuMoo_76
(RtcB-like RNA ligase)

SuMoo_77

SuMoo_78

SuMoo_79

SuMoo_80

SuMoo_81 — tRNA
(tRNA-Trp(cca))

SuMoo_82 — tRNA
(tRNA-Asn(gtt))

SuMoo_83
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ184831
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1E11
Pitt Freezer Box# 170
Pitt Freezer Box Grid# B7
Available Files
GenBank File for PhameratorDownload