| Detailed Information for Phage TraderJ | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Halo Byrd, Morgan Dam |
| Year Found | 2025 |
| Location Found | Los Angeles, CA United States |
| Finding Institution | Gonzaga University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 21°C |
| GPS Coordinates | 34.199959 N, 118.188423 E Map |
| Naming Notes | Found in a Trader Joe's plant. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 15, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Paired-end reads |
| Read Length | 300 bp |
| Approximate Shotgun Coverage | 5718 |
| Genome length (bp) | 61168 |
| Character of genome ends | Circularly Permuted |
| GC Content | 68.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DR |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Gonzaga University |
| Annotation Status | Being Annotated (Expected completion by 12/31/2025) |
| Plaque Notes | Trader J produced many small, clear plaques, which suggest that there was a high replication rate and strong lytic activity |
| Morphotype | Siphoviridae |
| Number of Genes | 85 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTraderJ_1 TraderJ_2 TraderJ_3 TraderJ_4 TraderJ_5 TraderJ_6 TraderJ_7 TraderJ_8 TraderJ_9 TraderJ_10 TraderJ_11 TraderJ_12 TraderJ_13 TraderJ_14 TraderJ_15 TraderJ_16 TraderJ_17 TraderJ_18 TraderJ_19 TraderJ_20 TraderJ_21 TraderJ_22 TraderJ_23 TraderJ_24 TraderJ_25 TraderJ_26 TraderJ_27 TraderJ_28 TraderJ_29 TraderJ_30 TraderJ_31 TraderJ_32 TraderJ_33 TraderJ_34 TraderJ_35 TraderJ_36 TraderJ_37 TraderJ_38 TraderJ_39 TraderJ_40 TraderJ_41 TraderJ_42 TraderJ_43 TraderJ_44 TraderJ_45 TraderJ_46 TraderJ_47 TraderJ_48 TraderJ_49 TraderJ_50 TraderJ_51 TraderJ_52 TraderJ_53 TraderJ_54 TraderJ_55 TraderJ_56 TraderJ_57 TraderJ_58 TraderJ_59 TraderJ_60 TraderJ_61 TraderJ_62 TraderJ_63 TraderJ_64 TraderJ_65 TraderJ_66 TraderJ_67 TraderJ_68 TraderJ_69 TraderJ_70 TraderJ_71 TraderJ_72 TraderJ_73 TraderJ_74 TraderJ_75 TraderJ_76 TraderJ_77 TraderJ_78 TraderJ_79 TraderJ_80 TraderJ_81 TraderJ_82 TraderJ_83 TraderJ_84 TraderJ_85 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |