Detailed Information for Phage Wooper |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Tyler Di Bari |
Year Found | 2020 |
Location Found | Las Vegas, NV United States of America |
Finding Institution | College of Southern Nevada |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 36.1 N, 115.11 W Map |
Discovery Notes | Found at a park pond. The pond is visited by many different bird species. The soil was collected at the edge of the pond so it was submerged in water. |
Naming Notes | Named after a water/ground pokemon |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 25, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 292 |
Genome length (bp) | 61155 |
Character of genome ends | Circularly Permuted |
GC Content | 68.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DR |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | SUNY Old Westbury |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 86 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP910132 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
117 |
Pitt Freezer Box Grid# |
E3 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |