Arthrobacter phage Zippen
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Detailed Information for Phage Zippen
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-4225
Found ByAmmi Paul
Year Found2024
Location FoundOttawa, Canada
Finding InstitutionUniversity of Ottawa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates45.360149 N, 75.65879 W Map
Discovery NotesRaised concrete plant bed at Greenboro Bus Station.
Naming NotesNamed after Zipper(1)(2). The producers of The Yard podcast.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage2463
Genome length (bp)58117
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGCCT
GC Content51.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAU
SubclusterAU7
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Ottawa
Annotation StatusIn GenBank
Plaque NotesMedium clear plaques.
MorphotypeSiphoviridae
Number of Genes96
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Zippen_1

Zippen_2

Zippen_3
(HNH endonuclease)

Zippen_4
(endolysin)

Zippen_5

Zippen_6
(head-to-tail adaptor)

Zippen_7

Zippen_8
(terminase)

Zippen_9

Zippen_10

Zippen_11
(acetyltransferase)

Zippen_12

Zippen_13

Zippen_14
(portal protein)

Zippen_15
(major capsid and protease fusion protein)

Zippen_16

Zippen_17
(tail terminator)

Zippen_18
(major tail protein)

Zippen_19

Zippen_20

Zippen_21
(minor tail protein)

Zippen_22
(major tail protein)

Zippen_23
(minor tail protein)

Zippen_24
(minor tail protein)

Zippen_25

Zippen_26
(tape measure protein)

Zippen_27
(minor tail protein)

Zippen_28
(minor tail protein)

Zippen_29

Zippen_30
(minor tail protein)

Zippen_31

Zippen_32

Zippen_33

Zippen_34

Zippen_35

Zippen_36

Zippen_37

Zippen_38

Zippen_39

Zippen_40

Zippen_41

Zippen_42

Zippen_43
(nucleotide pyrophosphohydrolase)

Zippen_44

Zippen_45

Zippen_46

Zippen_47

Zippen_48

Zippen_49

Zippen_50

Zippen_51

Zippen_52

Zippen_53

Zippen_54

Zippen_55

Zippen_56

Zippen_57

Zippen_58

Zippen_59

Zippen_60
(DNA primase/polymerase)

Zippen_61

Zippen_62

Zippen_63

Zippen_64

Zippen_65

Zippen_66
(SSB protein)

Zippen_67

Zippen_68

Zippen_69

Zippen_70
(PnuC-like Nicotinamide riboside transporter)

Zippen_71

Zippen_72

Zippen_73

Zippen_74

Zippen_75
(HNH endonuclease)

Zippen_76

Zippen_77

Zippen_78

Zippen_79
(DNA helicase)

Zippen_80

Zippen_81

Zippen_82
(HNH endonuclease)

Zippen_83

Zippen_84

Zippen_85

Zippen_86

Zippen_87

Zippen_88

Zippen_89

Zippen_90

Zippen_91

Zippen_92

Zippen_93
(VRR-Nuc domain protein)

Zippen_94
(Cas4 family exonuclease)

Zippen_95
(helix-turn-helix DNA binding domain)

Zippen_96

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV915823
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 203
Pitt Freezer Box Grid# F7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload