Mycobacterium phage Fishburne
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Detailed Information for Phage Fishburne
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlana Guziewicz
Year Found2011
Location FoundCharleston, SC USA
Finding InstitutionCollege of Charleston
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates32.792778 N, 79.952778 W Map
Discovery NotesEnvironmental soil sample taken off of Fishburne Street in downtown Charleston.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 21, 2012
Approximate Shotgun Coverage210
Genome length (bp)47109
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceCCCGCCCCCCGA
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesSmall, Clear, Spread out
MorphotypeSiphoviridae
Number of Genes77
Has been Phamerated?Yes
Gene List

Click to View

Fishburne_1
(terminase small subunit)

Fishburne_2
(terminase large subunit)

Fishburne_3
(portal protein)

Fishburne_4
(capsid maturation protease)

Fishburne_5
(scaffolding protein)

Fishburne_6
(major capsid protein)

Fishburne_7

Fishburne_8
(head-to-tail connector complex protein)

Fishburne_9
(head-to-tail connector complex protein)

Fishburne_10

Fishburne_11

Fishburne_12

Fishburne_13
(head-to-tail connector complex protein)

Fishburne_14
(major tail subunit)

Fishburne_15
(tail assembly chaperone)

Fishburne_16
(tail assembly chaperone)

Fishburne_17
(tape measure protein)

Fishburne_18
(minor tail protein)

Fishburne_19
(minor tail protein)

Fishburne_20
(minor tail protein)

Fishburne_21
(minor tail protein)

Fishburne_22

Fishburne_23

Fishburne_24

Fishburne_25

Fishburne_26
(lysin A)

Fishburne_27
(lysin B)

Fishburne_28

Fishburne_29

Fishburne_30
(integrase)

Fishburne_31
(immunity repressor)

Fishburne_32

Fishburne_33

Fishburne_34
(antirepressor)

Fishburne_35

Fishburne_36

Fishburne_37

Fishburne_38

Fishburne_39

Fishburne_40

Fishburne_41

Fishburne_42

Fishburne_43

Fishburne_44

Fishburne_45
(RecE)

Fishburne_46
(RecT)

Fishburne_47

Fishburne_48
(FtsK-like protein)

Fishburne_49
(RusA-like protein)

Fishburne_50

Fishburne_51

Fishburne_52

Fishburne_53

Fishburne_54

Fishburne_55
(HTH DNA binding protein)

Fishburne_56

Fishburne_57
(DNA methylase)

Fishburne_58

Fishburne_59

Fishburne_60

Fishburne_61
(HTH DNA binding protein)

Fishburne_62

Fishburne_63

Fishburne_64

Fishburne_65

Fishburne_66

Fishburne_67

Fishburne_68

Fishburne_69

Fishburne_70

Fishburne_71

Fishburne_72

Fishburne_73

Fishburne_74

Fishburne_75

Fishburne_76

Fishburne_77

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKC691256
Refseq NumberNC_021302
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator 2011CCHAfishburneAG
Pitt Freezer Box# 22
Pitt Freezer Box Grid# 7
Available Files
EM PictureDownload