Mycobacterium phage Kinbote
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Detailed Information for Phage Kinbote
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDavid Dittrich
Year Found2013
Location FoundWilliamsburg, VA USA
Finding InstitutionCollege of William & Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates37.271389 N, 76.721944 W Map
Discovery NotesTiter: 64.e+9 pfu/ml
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2027
Genome length (bp)53746
Character of genome ends3' Sticky Overhang
Overhang Length14 bases
Overhang SequenceTAAGCCGCGCGGTA
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterQ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members

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Amochick

Amymech

Daegal

DeepSoil15

Dewey

Ein37

Evanesce

Forge

Gancho

Giles

Gravaillia

Hadrien

Hail

HH92

Kinbote

LilHazelnut

Luke

Luna22

OBUpride

Ubuntu

Webster2

Wishmaker
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes84
Has been Phamerated?Yes
Gene List

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Kinbote_1
(terminase small subunit)

Kinbote_2

Kinbote_3

Kinbote_4

Kinbote_5
(terminase large subunit)

Kinbote_6
(portal protein)

Kinbote_7
(capsid maturation protease)

Kinbote_8
(scaffolding protein)

Kinbote_9
(major capsid protein)

Kinbote_10
(head-to-tail connector)

Kinbote_11
(head-to-tail connector)

Kinbote_12
(head-to-tail connector)

Kinbote_13
(head-to-tail connector)

Kinbote_14
(head-to-tail connector)

Kinbote_15
(major tail subunit)

Kinbote_16

Kinbote_17

Kinbote_18

Kinbote_19

Kinbote_20
(tape measure protein)

Kinbote_21
(distal tail protein)

Kinbote_22
(minor tail protein)

Kinbote_23

Kinbote_24

Kinbote_25

Kinbote_26

Kinbote_27

Kinbote_28

Kinbote_29
(integrase)

Kinbote_30
(excise protein)

Kinbote_31

Kinbote_32
(lysin A)

Kinbote_33
(lysin B)

Kinbote_34

Kinbote_35

Kinbote_36

Kinbote_37

Kinbote_38

Kinbote_39

Kinbote_40

Kinbote_41

Kinbote_42

Kinbote_43

Kinbote_44

Kinbote_45

Kinbote_46

Kinbote_47

Kinbote_48

Kinbote_49

Kinbote_50

Kinbote_51

Kinbote_52

Kinbote_53
(HTH DNA binding protein)

Kinbote_54
(RecE-like protein)

Kinbote_55
(RecT-like protein)

Kinbote_56

Kinbote_57

Kinbote_58

Kinbote_59

Kinbote_60

Kinbote_61

Kinbote_62

Kinbote_63
(DNA polymerase)

Kinbote_64

Kinbote_65
(methyltransferase)

Kinbote_66

Kinbote_67

Kinbote_68

Kinbote_69

Kinbote_70

Kinbote_71

Kinbote_72
(RuvC-like protein)

Kinbote_73
(WhiB)

Kinbote_74
(HTH DNA-binding protein)

Kinbote_75

Kinbote_76

Kinbote_77

Kinbote_78

Kinbote_79

Kinbote_80

Kinbote_81
(HNH endonuclease)

Kinbote_82

Kinbote_83

Kinbote_84
Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT222940
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# G9