Dedrick et al. (2021a) mBio, M. abscessus Prophage/Plasmid Mobilome Paper Materials

Figure S1. Integration-dependent immunity systems
Figure S2. Genome organization of prophiGD17-2, Cluster MabA1
Figure S3. Genome comparisons of Cluster MabA1
Figure S4. Genome organization of prophiGD02-2, Cluster MabA2
Figure S5. Genome comparisons of Cluster MabA2
Figure S6. Genome organization of prophiGD91-2, Cluster MabA3
Figure S7. Genome organization of prophiGD08-2, Cluster MabB
Figure S8. Genome comparisons of Cluster MabB
Figure S9. Genome organization of prophiGD57-1, Cluster MabC
Figure S10. Genome comparisons of Cluster MabC
Figure S11. Genome organization of prophiGD12-2, Cluster MabD
Figure S12. Genome comparisons of Cluster MabD
Figure S13. Genome organization of prophiGD25-1, Cluster MabE1
Figure S14. Genome comparisons of Cluster MabE1
Figure S15. Genome organization of prophiGD91-4, Cluster MabE2
Figure S16. Genome organization of prophiGD11-3, Cluster MabF
Figure S17. Genome comparisons of Cluster MabF
Figure S18. Genome organization of prophiGD21-3, Cluster MabG
Figure S19. Genome comparisons of Cluster MabG
Figure S20. Genome organization of prophiGD36-2, Cluster MabH
Figure S21. Genome comparisons of Cluster MabH
Figure S22. Genome organization of prophiGD54-2. Cluster MabI
Figure S23. Genome organization of prophiGD24-3, Cluster MabJ
Figure S24. Genome organization of prophiGD43A-5, Cluster MabK
Figure S25. Genome organization of prophiGD43A-6, Cluster MabL
Figure S26. Genome comparisons of Cluster MabL
Figure S27. Genome organization of prophiGD05-3, Cluster MabM
Figure S28. Genome organization of prophiGD62-3, Cluster MabN
Figure S29. Genome comparisons of Cluster MabN
Figure S30. Genome organization of prophiGD91-3, Cluster MabO
Figure S31. Genome organization of prophiGD51-2, Cluster MabP
Figure S32. Genome organization of prophiGD79-1, Cluster MabQ
Figure S33. Genome organization and comparisons of Cluster pA plasmids
Figure S34. Genome organization of plasmid pGD18, Cluster pB
Figure S35. Genome organization and comparisons of Cluster pB plasmids
Figure S36. Genome organization and comparisons of Cluster pC plasmids
Figure S37. Genome organization and comparisons of Cluster pD plasmids
Figure S38. Genome organization and comparisons of Cluster pE plasmids
Figure S39. Genome organization and comparisons of Cluster pF plasmids
Figure S40. Genome organization of plasmid pGD25-2, Cluster pG
Figure S41. Genome organization and comparisons of Cluster pG plasmids
Figure S42. Genome organization of plasmid pGD58, Cluster pH
Figure S43. Genome organization of plasmid pATCC19977, singleton
Figure S44. Genome organization of plasmid pGD13, singleton
Figure S45. Genome organization of plasmid pGD21-1, singleton
Figure S46. Genome organization of plasmid pGD21-2, singleton
Figure S47. Genome organization of plasmid pGD22-1, singleton
Figure S48. Genome organization of plasmid pGD25-3, singleton
Figure S49. Genome organization of plasmid pGD51, singleton
Figure S50. Genome organization of plasmid pGD52, singleton
Figure S51. Genome organization of plasmid pGD104, singleton
Table S1. attB sites in M. abscessus
Table S2. Predicted M. abscessus prophage immunity groups
Table S3. Types of Polymorphic Toxin-Immunity configurations
Legends for Supplementary Figures