Detailed Information for Phage Ajin |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Alexis Nefe |
Year Found | 2023 |
Location Found | Clarksville, TN United States |
Finding Institution | Austin Peay State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 11°C |
GPS Coordinates | 36.475315 N, 87.244529 W Map |
Discovery Notes | The soil sample collected was located in the backyard of my house in a plant bed. The soil was moist and was collected after digging up soil from a depth of 8 cm below the ground level. The temperature outside was around 51 degrees Celsius. |
Naming Notes | The name of this phage came from a Japanese word included in the name of an animation. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 836 |
Genome length (bp) | 56993 |
Character of genome ends | Circularly Permuted |
GC Content | 62.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EF |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Austin Peay State University |
Annotation Status | In GenBank |
Number of Genes | 86 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978814 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
175 |
Pitt Freezer Box Grid# |
H11 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |