| Detailed Information for Phage Aloki | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Natalie Hodge, Sterling Hargrove |
| Year Found | 2021 |
| Location Found | Sellersburg, IN United States |
| Finding Institution | Indiana University-Southeast |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 73°C |
| GPS Coordinates | 38.375278 N, 85.808333 W Map |
| Discovery Notes | This was dug up in a local dog park in Sellersburg Indiana. |
| Naming Notes | This is named after Alligator Loki. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 26, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 2038 |
| Genome length (bp) | 88511 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Indiana University-Southeast |
| Annotation Status | Overdue (Expected completion by 10/26/2024) |
| Plaque Notes | Our plaques where clear, and grainy. They where about 2 mm in width. Rigged edges. |
| Morphotype | Myoviridae |
| Number of Genes | 119 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAloki_1 Aloki_2 Aloki_3 Aloki_4 Aloki_5 Aloki_6 Aloki_7 Aloki_8 Aloki_9 Aloki_10 Aloki_11 Aloki_12 Aloki_13 Aloki_14 Aloki_15 Aloki_16 Aloki_17 Aloki_18 Aloki_19 Aloki_20 Aloki_21 Aloki_22 Aloki_23 Aloki_24 Aloki_25 Aloki_26 Aloki_27 Aloki_28 Aloki_29 Aloki_30 Aloki_31 Aloki_32 Aloki_33 Aloki_34 Aloki_35 Aloki_36 Aloki_37 Aloki_38 Aloki_39 Aloki_40 Aloki_41 Aloki_42 Aloki_43 Aloki_44 Aloki_45 Aloki_46 Aloki_47 Aloki_48 Aloki_49 Aloki_50 Aloki_51 Aloki_52 Aloki_53 Aloki_54 Aloki_55 Aloki_56 Aloki_57 Aloki_58 Aloki_59 Aloki_60 Aloki_61 Aloki_62 Aloki_63 Aloki_64 Aloki_65 Aloki_66 Aloki_67 Aloki_68 Aloki_69 Aloki_70 Aloki_71 Aloki_72 Aloki_73 Aloki_74 Aloki_75 Aloki_76 Aloki_77 Aloki_78 Aloki_79 Aloki_80 Aloki_81 Aloki_82 Aloki_83 Aloki_84 Aloki_85 Aloki_86 Aloki_87 Aloki_88 Aloki_89 Aloki_90 Aloki_91 Aloki_92 Aloki_93 Aloki_94 Aloki_95 Aloki_96 Aloki_97 Aloki_98 Aloki_99 Aloki_100 Aloki_101 Aloki_102 Aloki_103 Aloki_104 Aloki_105 Aloki_106 Aloki_107 Aloki_108 Aloki_109 Aloki_110 Aloki_111 Aloki_112 Aloki_113 Aloki_114 Aloki_115 Aloki_116 Aloki_117 Aloki_118 — tRNA Aloki_119 Aloki_120 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 139 |
| Pitt Freezer Box Grid# | E10 |