Detailed Information for Phage Blessica |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Bryn Tran and Jessica Hall |
Year Found | 2018 |
Location Found | Boulder, CO USA |
Finding Institution | University of Colorado Boulder |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 37°C |
GPS Coordinates | 40.009 N, 105.2719 W Map |
Discovery Notes | Phage was found nearer to the sidewalk. |
Naming Notes | The name is a blend between Bryn and Jessica |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 10, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3001 |
Genome length (bp) | 71470 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 4 bases |
Overhang Sequence | GTGT |
GC Content | 65.4% |
Sequencing Notes | About 25% of the reads in this sample showed a 3629 bp deletion from position 69096 to 72724 (inclusive). |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | O |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Colorado Boulder |
Annotation Status | In GenBank |
Plaque Notes | Produced lytic plaques due to its clear and small morphology, |
Morphotype | Siphoviridae |
Number of Genes | 127 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN585964 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
92 |
Pitt Freezer Box Grid# |
B12 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |