Rhodococcus phage Bonanza
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Detailed Information for Phage Bonanza
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found ByAbby Carter, Peyton Zalewski, Austin Nettles
Year Found2016
Location FoundKeithville, LA USA
Finding InstitutionUniversity of Louisiana at Monroe
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates32.361372 N, 93.814381 W Map
Discovery Notesin an old garden
Naming Notesnamed after the street found on
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage166
Genome length (bp)46932
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
GC Content58.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque Notessmall clear plaques
MorphotypeSiphoviridae
Number of Genes66
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Bonanza_1

Bonanza_2

Bonanza_3

Bonanza_4 — tRNA

Bonanza_5 — tRNA

Bonanza_6 — tRNA

Bonanza_7
(endolysin)

Bonanza_8
(terminase large subunit)

Bonanza_9
(portal protein)

Bonanza_10
(capsid maturation protease)

Bonanza_11
(scaffolding protein)

Bonanza_12
(major capsid protein)

Bonanza_13

Bonanza_14
(head-to-tail adaptor)

Bonanza_15
(head-to-tail stopper)

Bonanza_16

Bonanza_17
(tail terminator)

Bonanza_18
(major tail protein)

Bonanza_20
(tail assembly chaperone)

Bonanza_19
(tail assembly chaperone)

Bonanza_21
(tape measure protein)

Bonanza_22
(minor tail protein)

Bonanza_23
(minor tail protein)

Bonanza_24
(minor tail protein)

Bonanza_25
(holin)

Bonanza_26

Bonanza_27

Bonanza_28

Bonanza_29
(serine integrase)

Bonanza_30

Bonanza_31

Bonanza_32
(deoxycytidylate deaminase)

Bonanza_33

Bonanza_34

Bonanza_35

Bonanza_36
(DNA polymerase I)

Bonanza_37
(helix-turn-helix DNA-binding domain protein)

Bonanza_38
(ThyX-like thymidylate synthase)

Bonanza_39

Bonanza_40

Bonanza_41
(ribonucleotide reductase)

Bonanza_42

Bonanza_43
(DNA binding protein)

Bonanza_44
(metallophosphoesterase)

Bonanza_45

Bonanza_46
(glutaredoxin)

Bonanza_47

Bonanza_48
(DNA primase)

Bonanza_49
(DNA primase)

Bonanza_50

Bonanza_51

Bonanza_52
(endonuclease VII)

Bonanza_53

Bonanza_54
(DnaB-like dsDNA helicase)

Bonanza_55

Bonanza_56

Bonanza_57
(Cas4 exonuclease)

Bonanza_58

Bonanza_59
(immunity repressor)

Bonanza_60

Bonanza_61

Bonanza_62

Bonanza_63

Bonanza_64

Bonanza_65
(ArdA-like antirestriction protein)

Bonanza_66

Bonanza_67

Bonanza_68

Bonanza_69

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF537628
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 32
Pitt Freezer Box Grid# F2
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload