Rhodococcus phage Bradshaw
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Detailed Information for Phage Bradshaw
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found ByCory Hayes
Year Found2014
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.44237 N, 79.93464 W Map
Naming NotesNamed after Steelers QB Terry Bradshaw
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 19, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2134
Genome length (bp)46606
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
End Determination NotesBuildups of reads from Illumina sequencing data.
GC Content58.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes65
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Bradshaw_1

Bradshaw_2

Bradshaw_3

Bradshaw_4 — tRNA
(tRNA-Asn(gtt))

Bradshaw_5 — tRNA
(tRNA-Undet (val/arg))

Bradshaw_6 — tRNA
(tRNA-Trp(cca))

Bradshaw_7
(endolysin)

Bradshaw_8
(terminase large subunit)

Bradshaw_9
(portal protein)

Bradshaw_10
(capsid maturation protease)

Bradshaw_11
(scaffolding protein)

Bradshaw_12
(major capsid protein)

Bradshaw_13

Bradshaw_14
(head-to-tail adaptor)

Bradshaw_15
(head-to-tail stopper)

Bradshaw_16

Bradshaw_17
(tail terminator)

Bradshaw_18
(major tail protein)

Bradshaw_19
(tail assembly chaperone)

Bradshaw_20
(tail assembly chaperone)

Bradshaw_21
(tape measure protein)

Bradshaw_22
(minor tail protein)

Bradshaw_23
(minor tail protein)

Bradshaw_24
(minor tail protein)

Bradshaw_25
(holin)

Bradshaw_26

Bradshaw_27
(minor tail protein)

Bradshaw_28

Bradshaw_29
(serine integrase)

Bradshaw_30

Bradshaw_31

Bradshaw_32
(deoxycytidylate deaminase)

Bradshaw_33

Bradshaw_34

Bradshaw_35

Bradshaw_36
(DNA polymerase I)

Bradshaw_37
(helix-turn-helix DNA-binding domain protein)

Bradshaw_38
(ThyX-like thymidylate synthase)

Bradshaw_39

Bradshaw_40

Bradshaw_41
(ribonucleotide reductase)

Bradshaw_42

Bradshaw_43
(DNA binding protein)

Bradshaw_44
(metallophosphoesterase)

Bradshaw_45

Bradshaw_46
(glutaredoxin)

Bradshaw_47

Bradshaw_48
(DNA primase)

Bradshaw_49
(DNA primase)

Bradshaw_50

Bradshaw_51
(endonuclease VII)

Bradshaw_52

Bradshaw_53
(DnaB-like dsDNA helicase)

Bradshaw_54

Bradshaw_55

Bradshaw_56
(Cas4 exonuclease)

Bradshaw_57

Bradshaw_58
(immunity repressor)

Bradshaw_59

Bradshaw_60

Bradshaw_61

Bradshaw_62

Bradshaw_63

Bradshaw_64
(ArdA-like antirestriction protein)

Bradshaw_65

Bradshaw_66

Bradshaw_67

Bradshaw_68

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH271293
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 4
Pitt Freezer Box Grid# C6
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload