Microbacterium phage Crestdrop
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Detailed Information for Phage Crestdrop
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByHailey Parker
Year Found2023
Location FoundSan Antonio, TX United States
Finding InstitutionUniversity of Texas at San Antonio
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates29.52076 N, 98.35155 W Map
Discovery NotesThe phage was found in a depth soil of 3.0 cm. The soil could be described as soft, crumbly, a medium brown color, dry, fine, and compact. It was found in the backyard of my duplex, where a canine defecates and urinates frequently, and the area is very grassy.
Naming NotesMy phage name came from the fact that there is fecal matter in the area it was found in and where it was discovered was on Crestway.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1954
Genome length (bp)56609
Character of genome endsCircularly Permuted
GC Content63.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEF
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Texas at San Antonio
Annotation StatusIn GenBank
Plaque NotesThe phage produces very clear spots where it grows, and is small in size, having a diameter of 0.1 cm. It looks like a clear dot surrounded by a slight cloudiness. It has a very round shape.
Number of Genes83
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Crestdrop_1

Crestdrop_2

Crestdrop_3

Crestdrop_4
(terminase small subunit)

Crestdrop_5

Crestdrop_6

Crestdrop_7

Crestdrop_8

Crestdrop_9

Crestdrop_10
(terminase large subunit)

Crestdrop_11

Crestdrop_12
(portal protein)

Crestdrop_13
(capsid maturation protease)

Crestdrop_14

Crestdrop_15
(scaffolding protein)

Crestdrop_16
(minor capsid protein)

Crestdrop_17
(major capsid protein)

Crestdrop_18

Crestdrop_19

Crestdrop_20
(head-to-tail stopper)

Crestdrop_21

Crestdrop_22
(tail terminator)

Crestdrop_23

Crestdrop_24

Crestdrop_25
(major tail protein)

Crestdrop_26
(tail assembly chaperone)

Crestdrop_27
(tail assembly chaperone)

Crestdrop_28
(tape measure protein)

Crestdrop_29
(minor tail protein)

Crestdrop_30
(minor tail protein)

Crestdrop_31
(minor tail protein)

Crestdrop_32
(minor tail protein)

Crestdrop_33

Crestdrop_34
(endolysin)

Crestdrop_35

Crestdrop_36

Crestdrop_37

Crestdrop_38

Crestdrop_39

Crestdrop_40
(DNA helicase)

Crestdrop_41

Crestdrop_42

Crestdrop_43
(Cas4 exonuclease)

Crestdrop_44

Crestdrop_45
(ASCE ATPase)

Crestdrop_46

Crestdrop_47
(DNA primase/helicase)

Crestdrop_48

Crestdrop_49

Crestdrop_50

Crestdrop_51

Crestdrop_52
(oxidoreductase)

Crestdrop_53
(ThyX-like thymidylate synthase)

Crestdrop_54

Crestdrop_55
(MazG-like nucleotide pyrophosphohydrolase)

Crestdrop_56
(DnaE-like DNA polymerase III alpha)

Crestdrop_57
(DnaE-like DNA polymerase III alpha)

Crestdrop_58

Crestdrop_59

Crestdrop_60

Crestdrop_61

Crestdrop_62

Crestdrop_63

Crestdrop_64

Crestdrop_65

Crestdrop_66

Crestdrop_67

Crestdrop_68

Crestdrop_69

Crestdrop_70

Crestdrop_71

Crestdrop_72

Crestdrop_73

Crestdrop_74
(RuvC-like resolvase)

Crestdrop_75

Crestdrop_76

Crestdrop_77

Crestdrop_78

Crestdrop_79

Crestdrop_80

Crestdrop_81

Crestdrop_82

Crestdrop_83

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ114741
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 170
Pitt Freezer Box Grid# H7
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload