| Detailed Information for Phage Hamood |
| Discovery Information |
| Isolation Host | Gordonia terrae CAG3 |
| Found By | Molly Kang |
| Year Found | 2023 |
| Location Found | Manhattan, KS United States |
| Finding Institution | Kansas State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 39.19416 N, 95.58667 W Map |
| Discovery Notes | In flower pot from Pi Beta Phi at 7:50AM. |
| Naming Notes | Named after a character in a TV show |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 22, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 145 |
| Genome length (bp) | 50919 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TGCCGCGGTA |
| GC Content | 67.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DI |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Patch assay confirmed phage was lysogenic. |
| Other Cluster Members |
|
| Annotating Institution | Kansas State University |
| Annotation Status | In GenBank |
| Plaque Notes | Small, Smooth edges, with perfect circles. |
| Morphotype | Siphoviridae |
| Number of Genes | 76 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ244015 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
6 x 10^10 |
| Pitt Freezer Box# |
177 |
| Pitt Freezer Box Grid# |
C11 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
