| Detailed Information for Phage Kabocha |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Naomi Jones |
| Year Found | 2019 |
| Location Found | Alexandria, VA United States of America |
| Finding Institution | George Mason University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 38.762808 N, 77.106372 W Map |
| Discovery Notes | Was isolated from my garden in Alexandria VA on September 3rd, 2019 |
| Naming Notes | The sample was isolated from soil near a rotting kabocha, or Japanese pumpkin, vine. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 12, 2022 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 273 |
| Genome length (bp) | 91206 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | George Mason University |
| Annotation Status | In GenBank |
| Plaque Notes | Temperate phage, very small plaques on plate |
| Morphotype | Myoviridae |
| Number of Genes | 129 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP867022 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
103 |
| Pitt Freezer Box Grid# |
C5 |
| Available Files |
| GenBank File for Phamerator | Download |