| Detailed Information for Phage Litotes |
| Discovery Information |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Former names | LooLoo |
| Found By | Joyce Lee, Linda Patterson, Jacqueline Urdang |
| Year Found | 2016 |
| Location Found | Northampton, MA USA |
| Finding Institution | Smith College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 70°C |
| GPS Coordinates | 42.318381 N, 72.637041 W Map |
| Discovery Notes | Soil sample found in the pond next to the Lyman greenhouse. |
| Naming Notes | Bacteriophag are destructive towards bacteria, and yet, they are good guys! We ironically called our phage LuLu in reference to Lucifer. But a cute, good-guy lucifer. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 6, 2017 |
| Sequencing Facility | Smith College |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2590 |
| Genome length (bp) | 43496 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | GGTAACCGTGATA |
| GC Content | 61.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AK |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | In our least concentrated agar plate (10^-5) we had 3 large plaques and 8 small plaques. Both were clear and not turbid with clearly defined edges. |
| Morphotype | Siphoviridae |
| Number of Genes | 62 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK279863 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
32 |
| Pitt Freezer Box Grid# |
E1 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
