Detailed Information for Phage OurGirlNessie |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Former names | KickassDragon |
Found By | Jane Milcetic, Sarita Quimpo-Chiu, Shi Ying Feng |
Year Found | 2016 |
Location Found | Northampton, MA USA |
Finding Institution | Smith College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 42.319362 N, 72.641215 W Map |
Discovery Notes | Discovered by the banks of Paradise Pond at Smith College. Soil is moist and chunky with some plant debris. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 6, 2017 |
Sequencing Facility | Smith College |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 4757 |
Genome length (bp) | 42561 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | GGTAACCGTGATA |
GC Content | 60.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AK |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Despite having an assumed pure phage (the phage used here was initially from a single plaque), it is important to note that there are small and big plaques. The inconsistency in size may also be attributed to an uneven distribution of bacteria. We conclude that plaque morphology is consistent, and looks to be a pure sample. |
Morphotype | Siphoviridae |
Number of Genes | 59 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK279869 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
32 |
Pitt Freezer Box Grid# |
E8 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |