| Detailed Information for Phage Oxynfrius |
| Discovery Information |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Former names | Arthrovicus |
| Found By | Abigale Bristol |
| Year Found | 2015 |
| Location Found | Denton, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.208536 N, 97.148406 W Map |
| Discovery Notes | Found in a soil of a patch of grass that experiences little to no traffic. The soil itself was moist and fertile (supporting healthy, green flora). The soil itself was sitting in a sterile 15mm conical tube four about a week before I began working with the sample. |
| Naming Notes | "Arthro-" pays homage to the success that the virus had over its host, Arthrobacter sp. "-vic-" is derived from the composer Ludovico Einaudi, and the suffix "-us" is for the sake of the Latin language. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 21, 2015 |
| Sequencing Facility | University of North Texas Health Science Center |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 262 |
| Sanger Finishing Reactions | 1 |
| Genome length (bp) | 44163 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | GGTAACCGTGATA |
| GC Content | 60.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AK |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques averaged to about .5mm-1mm in diameter, entirely clear, with relatively hazy edges. |
| Morphotype | Siphoviridae |
| Number of Genes | 62 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KX688102 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
6.0 x 10^9 pfu/mL |
| Date of SEA Lysate Titering |
May 1, 2015 |
| Pitt Freezer Box# |
20 |
| Pitt Freezer Box Grid# |
E11 |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |