Microbacterium phage PhunaPhoke
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Detailed Information for Phage PhunaPhoke
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByGabrielle Pascual and Bijaya Manandhar
Year Found2022
Location FoundPhiladelphia, PA USA
Finding InstitutionDrexel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature24°C
GPS Coordinates39.953168 N, 75.179978 W Map
Discovery NotesThe soil was collected at 24 degrees Celcius weather at 9:03 PM. It was surrounded by plants and enclosed in a concrete curb by Schuylkill River Trail.
Naming NotesMy partner and I were hungry during lab and realized we both love Tuna Poke
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 2, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1927
Genome length (bp)56687
Character of genome endsCircularly Permuted
GC Content63.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEF
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionDrexel University
Annotation StatusIn GenBank
Plaque NotesSmall and circular
Number of Genes82
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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PhunaPhoke_1

PhunaPhoke_2

PhunaPhoke_3

PhunaPhoke_4

PhunaPhoke_5

PhunaPhoke_6

PhunaPhoke_7

PhunaPhoke_8

PhunaPhoke_9

PhunaPhoke_10

PhunaPhoke_11
(terminase)

PhunaPhoke_12

PhunaPhoke_13
(portal protein)

PhunaPhoke_14
(capsid maturation protease)

PhunaPhoke_15

PhunaPhoke_16

PhunaPhoke_17
(minor capsid protein)

PhunaPhoke_18
(major capsid protein)

PhunaPhoke_19

PhunaPhoke_20

PhunaPhoke_21
(head-to-tail stopper)

PhunaPhoke_22

PhunaPhoke_23
(tail terminator)

PhunaPhoke_24

PhunaPhoke_25

PhunaPhoke_26
(major tail protein)

PhunaPhoke_27
(tail assembly chaperone)

PhunaPhoke_28
(tail assembly chaperone)

PhunaPhoke_29
(tape measure protein)

PhunaPhoke_30
(minor tail protein)

PhunaPhoke_31
(minor tail protein)

PhunaPhoke_32
(minor tail protein)

PhunaPhoke_33
(minor tail protein)

PhunaPhoke_34

PhunaPhoke_35
(endolysin)

PhunaPhoke_36

PhunaPhoke_37

PhunaPhoke_38
(holin)

PhunaPhoke_39

PhunaPhoke_40
(DNA helicase)

PhunaPhoke_41

PhunaPhoke_42

PhunaPhoke_43
(RecB-like exonuclease/helicase)

PhunaPhoke_44

PhunaPhoke_45
(RecA-like DNA recombinase)

PhunaPhoke_46

PhunaPhoke_47
(DNA primase/helicase)

PhunaPhoke_48

PhunaPhoke_49

PhunaPhoke_50

PhunaPhoke_51

PhunaPhoke_52
(oxidoreductase)

PhunaPhoke_53
(ThyX-like thymidylate synthase)

PhunaPhoke_54

PhunaPhoke_55

PhunaPhoke_56
(DnaE-like DNA polymerase III alpha)

PhunaPhoke_57
(DnaE-like DNA polymerase III alpha)

PhunaPhoke_58

PhunaPhoke_59

PhunaPhoke_60

PhunaPhoke_61

PhunaPhoke_62

PhunaPhoke_63

PhunaPhoke_64

PhunaPhoke_65

PhunaPhoke_66

PhunaPhoke_67

PhunaPhoke_68

PhunaPhoke_69

PhunaPhoke_70

PhunaPhoke_71

PhunaPhoke_72

PhunaPhoke_73
(RuvC-like resolvase)

PhunaPhoke_74

PhunaPhoke_75

PhunaPhoke_76

PhunaPhoke_77

PhunaPhoke_78

PhunaPhoke_79

PhunaPhoke_80

PhunaPhoke_81

PhunaPhoke_82

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR613474
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 161
Pitt Freezer Box Grid# H8
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload