Detailed Information for Phage RcigaStruga |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Rexhina Struga |
Year Found | 2015 |
Location Found | Radnor, PA USA |
Finding Institution | Cabrini University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.070497 N, 75.3788 W Map |
Discovery Notes | I found it at Cabrini College near a parking lot. |
Naming Notes | Every letter in the name is the first letter of all my sisters (4). |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 17, 2015 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1761 |
Genome length (bp) | 43891 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | GGTAACCGTGATA |
GC Content | 60.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AK |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | The plaques are very small. But with varying Calcium Chloride concentration the plaque size grows. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KX576640 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Designator |
Cabrini College |
SEA Lysate Titer |
5.63 X 10^8 |
Date of SEA Lysate Titering |
Jun 10, 2015 |
Pitt Freezer Box# |
149 |
Pitt Freezer Box Grid# |
D2 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |