Detailed Information for Phage Rideau | |
Discovery Information | |
Isolation Host | Streptomyces avermitilis NRRL 8165 |
Found By | Alex Yang |
Year Found | 2023 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 13°C |
GPS Coordinates | 45.422659 N, 75.689735 W Map |
Discovery Notes | Liquid sample taken from Rideau Canal approximately 30 cm from surface of water from the edge of the canal. Various aquatic animals present such as ducks, fish, turtles. |
Naming Notes | Named after the Rideau Canal where the sample was taken from. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 22, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 296 |
Genome length (bp) | 46053 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 254 bp |
GC Content | 60.4% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | BF |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | University of Ottawa |
Annotation Status | Overdue (Expected completion by 8/31/2024) |
Plaque Notes | Small turbid plaques. |
Number of Genes | 69 |
Number of tRNAs | 23 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewRideau_1 Rideau_2 Rideau_3 Rideau_4 Rideau_5 Rideau_6 Rideau_7 Rideau_8 Rideau_9 Rideau_10 Rideau_11 Rideau_12 Rideau_13 Rideau_14 Rideau_15 — tRNA Rideau_16 — tRNA Rideau_17 — tRNA Rideau_18 — tRNA Rideau_19 — tRNA Rideau_20 — tRNA Rideau_21 — tRNA Rideau_22 — tRNA Rideau_23 — tRNA Rideau_24 — tRNA Rideau_25 — tRNA Rideau_26 — tRNA Rideau_27 — tRNA Rideau_28 — tRNA Rideau_29 — tRNA Rideau_30 — tRNA Rideau_31 — tRNA Rideau_32 — tRNA Rideau_33 — tRNA Rideau_34 — tRNA Rideau_35 — tRNA Rideau_36 — tRNA Rideau_37 Rideau_38 Rideau_39 Rideau_40 Rideau_41 Rideau_42 Rideau_43 Rideau_44 Rideau_45 Rideau_46 Rideau_47 Rideau_48 Rideau_49 Rideau_50 Rideau_51 Rideau_52 Rideau_53 Rideau_54 Rideau_55 Rideau_56 Rideau_57 Rideau_58 Rideau_59 Rideau_60 Rideau_61 Rideau_62 Rideau_63 Rideau_64 Rideau_65 Rideau_66 Rideau_67 Rideau_68 — tRNA Rideau_69 Rideau_70 Rideau_71 Rideau_72 Rideau_73 Rideau_74 Rideau_75 Rideau_76 Rideau_77 Rideau_78 Rideau_79 Rideau_80 Rideau_81 Rideau_82 Rideau_83 Rideau_84 Rideau_85 Rideau_86 Rideau_87 Rideau_88 Rideau_89 Rideau_90 Rideau_91 Rideau_92 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
SEA Lysate Titer | 6.0 x10^9 |
Pitt Freezer Box# | 176 |
Pitt Freezer Box Grid# | G8 |