| Detailed Information for Phage Riovina |
| Discovery Information |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Giovanna Sabini-Leite, Katerina Rusa, Reem Ladadwa |
| Year Found | 2017 |
| Location Found | Northampton, MA USA |
| Finding Institution | Smith College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.318222 N, 72.639713 W Map |
| Discovery Notes | Botanical Garden - Fountain
Date and time collected: 18.09.2017
Temperature: 22℃
Weather: cloudy, earlier today it was foggy and drizzling
Consistency of soil: wet, dark
How deep: about 15 cm |
| Naming Notes | The name is a combination of the names of the discoverers. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 8, 2018 |
| Sequencing Facility | Smith College |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1406 |
| Genome length (bp) | 43739 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | GCTTACCGTGATA |
| GC Content | 61.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AK |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | The plaque appears to be in the lytic phase. |
| Morphotype | Siphoviridae |
| Number of Genes | 60 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK279874 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
9.6*10^11 |
| Pitt Freezer Box# |
58 |
| Pitt Freezer Box Grid# |
H9 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
