Arthrobacter phage Sicarius2
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Detailed Information for Phage Sicarius2
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Former namesAglobicarius
Found ByCody Back
Year Found2019
Location FoundPueblo, CO USA
Finding InstitutionColorado State University-Pueblo
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates38.306343 N, 104.580664 W Map
Discovery NotesCSU-Pueblo. In a flooded/muddy ditch in fertilized soil.
Naming NotesPicked a name that was in latin and fitting its behavior. Original name was Globiformisicarius, but it would not fit in the Phage Name entry cell.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage828
Genome length (bp)49221
Character of genome endsCircularly Permuted
GC Content63.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAO
SubclusterAO2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of California, Los Angeles
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes79
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Sicarius2_1
(helix-turn-helix DNA binding domain protein)

Sicarius2_2
(terminase)

Sicarius2_3
(portal protein)

Sicarius2_4
(capsid maturation protease)

Sicarius2_5

Sicarius2_6

Sicarius2_7
(nuclease)

Sicarius2_8
(scaffolding protein)

Sicarius2_9

Sicarius2_10
(major capsid protein)

Sicarius2_11

Sicarius2_12

Sicarius2_13
(minor tail protein)

Sicarius2_14

Sicarius2_15

Sicarius2_16
(tail sheath protein)

Sicarius2_17
(tail tube protein)

Sicarius2_18

Sicarius2_19

Sicarius2_20
(tape measure protein)

Sicarius2_21
(LysM-like peptidoglycan binding protein)

Sicarius2_22
(minor tail protein)

Sicarius2_23

Sicarius2_24
(minor tail protein)

Sicarius2_25
(minor tail protein)

Sicarius2_26

Sicarius2_27

Sicarius2_28
(holin)

Sicarius2_29
(endolysin)

Sicarius2_30

Sicarius2_31
(baseplate wedge protein)

Sicarius2_32
(baseplate J protein)

Sicarius2_33
(minor tail protein)

Sicarius2_34

Sicarius2_35
(exonuclease)

Sicarius2_36
(RecT-like DNA pairing protein)

Sicarius2_37
(helix-turn-helix DNA binding domain protein)

Sicarius2_38
(ssDNA binding protein)

Sicarius2_39

Sicarius2_40
(helix-turn-helix DNA binding domain protein)

Sicarius2_41
(helix-turn-helix DNA binding domain protein)

Sicarius2_42

Sicarius2_43

Sicarius2_44
(RusA-like resolvase)

Sicarius2_45

Sicarius2_46

Sicarius2_47

Sicarius2_48

Sicarius2_49

Sicarius2_50

Sicarius2_51

Sicarius2_52

Sicarius2_53

Sicarius2_54

Sicarius2_55
(helix-turn-helix DNA binding domain protein)

Sicarius2_56

Sicarius2_57

Sicarius2_58

Sicarius2_59

Sicarius2_60

Sicarius2_61

Sicarius2_62

Sicarius2_63

Sicarius2_64

Sicarius2_65

Sicarius2_66

Sicarius2_67
(endolysin)

Sicarius2_68

Sicarius2_69

Sicarius2_70

Sicarius2_71
(ParB-like nuclease domain protein)

Sicarius2_72
(acetyltransferase)

Sicarius2_73

Sicarius2_74
(helix-turn-helix DNA binding domain protein)

Sicarius2_75
(DNA polymerase III sliding clamp)

Sicarius2_76

Sicarius2_77

Sicarius2_78

Sicarius2_79

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW862982
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 103
Pitt Freezer Box Grid# F7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload