| Detailed Information for Phage UBSmoodge |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Ryal Tilleth |
| Year Found | 2023 |
| Location Found | Las Vegas, NV United States of America |
| Finding Institution | College of Southern Nevada |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 36.233 N, 115.083 W Map |
| Discovery Notes | Found near basic flora (trees and grass) near a walkway for people and plates not entirely in a grassy/flowery filled area. |
| Naming Notes | UBSmoodge - from cat since "smudge" is taken, the nickname was uses smoodge, UB represents the phage kinda "Ultra Beast" |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 17, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 167 |
| Genome length (bp) | 92786 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | College of Southern Nevada |
| Annotation Status | In GenBank |
| Plaque Notes | Small, clear plaques but not distinct, |
| Number of Genes | 130 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ201087 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
171 |
| Pitt Freezer Box Grid# |
A5 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
