| Detailed Information for Phage Vorrps |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Valerie Otti, Peeti Sithiyopasakul and Rahul |
| Year Found | 2014 |
| Location Found | St. Louis , MO USA |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.648545 N, 90.312214 W Map |
| Discovery Notes | The temperature was about 82° F during soil extraction and Rahul dug 12cm deep into soil. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 27, 2018 |
| Sequencing Facility | The McDonnell Genome Institute at Washington University |
| Shotgun Sequencing Method | Pacific Biosciences |
| Approximate Shotgun Coverage | 1244 |
| Sanger Finishing Reactions | 3 |
| Genome length (bp) | 71722 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 4 bases |
| Overhang Sequence | GTCT |
| GC Content | 65.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | O |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Washington University in St. Louis |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are about 1mm in diameter and also very clear. |
| Morphotype | Siphoviridae |
| Number of Genes | 127 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH926062 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| SEA Lysate Titer |
3.32 x10^9 |
| Date of SEA Lysate Titering |
Nov 4, 2014 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
