Detailed Information for Phage Wayne |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Deborah Jacobs-Sera |
Year Found | 2012 |
Location Found | USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.326528 N, 79.677959 W Map |
Discovery Notes | Sample was obtained in a front yard island bed of rhododendron and ivy below a Canada Red cherry tree. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 28, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3498 |
Genome length (bp) | 44371 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | GGTAACCGTGATA |
GC Content | 61.1% |
Sequencing Notes | Originally seeunced with Ion Torent. Re-sequenced with Illumina (3/2017). The changes are: 16001 G substitution for A. 17906 T substitution for G, and 19091 C for G, and 19109 C substitution for A. C insertion at 35247. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AK |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaque morphology is clear and round, ranging in diameter from 1 to 3 mm. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU160672 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
A2 |
Available Files |
Plaque Picture | Download |
Virtual Digest Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |