Microbacterium phage Platte
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Detailed Information for Phage Platte
Discovery Information
Isolation HostMicrobacterium paraoxydans NWU1
Found ByAnnie Cooper
Year Found2019
Location FoundInglewood, NE United States
Finding InstitutionNebraska Wesleyan University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature29°C
GPS Coordinates41.4135 N, 96.5032 W Map
Discovery Notesnear a garden that was impacted by the flooded river
Naming Notesfound near the platte river when it flooded
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 26, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1421
Genome length (bp)62728
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length3180 bp
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterED
SubclusterED1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionNebraska Wesleyan University
Annotation StatusIn GenBank
Plaque Notessiphoviridae
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Platte_1

Platte_2

Platte_3

Platte_4

Platte_5

Platte_6

Platte_7

Platte_8

Platte_9

Platte_10

Platte_11

Platte_12

Platte_13

Platte_14

Platte_15

Platte_16

Platte_17

Platte_18

Platte_19

Platte_23

Platte_24

Platte_25

Platte_26

Platte_27

Platte_28
(thioredoxin)

Platte_29
(exonuclease)

Platte_30

Platte_31
(terminase)

Platte_32
(portal protein)

Platte_33
(capsid maturation protease)

Platte_34

Platte_35
(major capsid protein)

Platte_36

Platte_37

Platte_38
(metallophosphoesterase)

Platte_39

Platte_40
(head-to-tail stopper)

Platte_41

Platte_42
(tail terminator)

Platte_43

Platte_44

Platte_45
(major tail protein)

Platte_46
(tail assembly chaperone)

Platte_47
(tail assembly chaperone)

Platte_48
(tape measure protein)

Platte_49

Platte_50
(minor tail protein)

Platte_51

Platte_52

Platte_53

Platte_54
(lysin A)

Platte_55

Platte_56

Platte_57
(RuvC-like resolvase)

Platte_58

Platte_59

Platte_60

Platte_61

Platte_62

Platte_63
(DNA primase/polymerase)

Platte_65

Platte_66

Platte_67

Platte_68
(exonuclease)

Platte_69

Platte_70
(exonuclease)

Platte_71

Platte_72

Platte_73

Platte_74
(RNA ligase)

Platte_75
(polynucleotide kinase)

Platte_76
(DNA helicase)

Platte_77

Platte_78

Platte_79

Platte_80

Platte_81

Platte_82

Platte_83

Platte_84

Platte_85

Platte_86

Platte_87

Platte_88

Platte_89

Platte_90

Platte_91

Platte_92

Platte_93

Platte_94

Platte_95

Platte_96

Platte_97
(helix-turn-helix DNA binding domain protein)

Platte_98

Platte_99

Platte_100

Platte_101

Platte_102

Platte_103

Platte_104

Platte_105

Platte_106

Platte_107

Platte_108

Platte_109

Platte_110

Platte_111

Platte_112

Platte_113

Platte_114

Platte_115

Platte_116

Platte_117

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ622166
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.20x10^10
Pitt Freezer Box# 110
Pitt Freezer Box Grid# B5
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload