Recently Added Phages

Chirp Qhaks Hlubikazi Kupa Likuwe

Recently Modified Phages

Fenn Beatrix Megamind Cookies Minima

Recently Finished Phages

Eugenia (B1) PSullivan (A1) Matalotodo (B1) Rohr (A1) Moose (A1)
Gordonia phage Rofo
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Rofo
Discovery Information
Isolation HostGordonia terrae 3612
Found ByZoë Simpson
Year Found2016
Location FoundRoyersford, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.177419 N, 75.528453 W Map
Discovery NotesSoil was collected from an area containing a lot of vegetation. The weather was warm but humid, and the soil was dry.
Naming Notes"Rofo" is the nickname locals use for my hometown of Royersford, where this phage was discovered.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 14, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2204
Genome length (bp)58767
Character of genome endsCircularly Permuted
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesRofo produces one morphology: round plaques that are 1 mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH479924
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.83x10^-10
Date of SEA Lysate Titering Oct 24, 2016
Pitt Freezer Box# 42
Pitt Freezer Box Grid# G10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload