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Gordonia phage Rofo
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Detailed Information for Phage Rofo
Discovery Information
Isolation HostGordonia terrae 3612
Found ByZoë Simpson
Year Found2016
Location FoundRoyersford, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.177419 N, 75.528453 W Map
Discovery NotesSoil was collected from an area containing a lot of vegetation. The weather was warm but humid, and the soil was dry.
Naming Notes"Rofo" is the nickname locals use for my hometown of Royersford, where this phage was discovered.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 14, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2204
Genome length (bp)58767
Character of genome endsCircularly Permuted
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
Subcluster--
Other Cluster Members
Plaque NotesRofo produces one morphology: round plaques that are 1 mm in diameter.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload