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Streptomyces phage Samisti12
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Detailed Information for Phage Samisti12
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByChristie Schaefer, Samna Rasheed
Year Found2012
Location FoundDenton, TX USA
Finding InstitutionUniversity of North Texas
ProgramUnavailable
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.235744 N, 97.157979 W Map
Discovery NotesDiscovered during the University of North Texas Summer Transitions Workshop.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 24, 2014
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage401
Genome length (bp)133710
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10666 bp
End Determination NotesBuildups of reads in the shotgun sequencing.
GC Content49.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Other Cluster Members
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes227
Number of tRNAs44
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Samisti12_1

Samisti12_2

Samisti12_3

Samisti12_4

Samisti12_5

Samisti12_6

Samisti12_7
(Lsr2 DNA bridging protein)

Samisti12_8

Samisti12_9

Samisti12_10

Samisti12_11

Samisti12_12

Samisti12_13

Samisti12_14

Samisti12_15

Samisti12_16

Samisti12_17

Samisti12_18

Samisti12_19

Samisti12_20

Samisti12_21
(HNH endonuclease)

Samisti12_22

Samisti12_23
(ThyX thymidylate synthase)

Samisti12_24
(HNH endonuclease)

Samisti12_25

Samisti12_26

Samisti12_27

Samisti12_28

Samisti12_29
(HNH endonuclease)

Samisti12_30

Samisti12_31

Samisti12_32

Samisti12_33

Samisti12_34
(nucleotidyl transferase)

Samisti12_35
(glycosyltransferase)

Samisti12_36

Samisti12_38
(HNH endonuclease)

Samisti12_39
(hydrolase)

Samisti12_40

Samisti12_41
(glycosyltransferase)

Samisti12_42
(ribonucleotide reductase)

Samisti12_43
(helix-turn-helix DNA binding domain)

Samisti12_44
(endolysin, LysM-like)

Samisti12_45

Samisti12_46

Samisti12_47
(portal protein)

Samisti12_48

Samisti12_49
(capsid maturation protease)

Samisti12_50
(major capsid protein)

Samisti12_51

Samisti12_52

Samisti12_53

Samisti12_54

Samisti12_55

Samisti12_56

Samisti12_57

Samisti12_58

Samisti12_59
(tape measure protein)

Samisti12_60
(minor tail protein)

Samisti12_61
(minor tail protein)

Samisti12_62

Samisti12_63
(minor tail protein)

Samisti12_64
(minor tail protein)

Samisti12_65

Samisti12_66

Samisti12_67

Samisti12_68
(HNH endonuclease)

Samisti12_69
(metallophosphoesterase)

Samisti12_70

Samisti12_71

Samisti12_72

Samisti12_73

Samisti12_74

Samisti12_75

Samisti12_76
(DNA helicase)

Samisti12_77

Samisti12_78
(DNA primase)

Samisti12_79

Samisti12_80
(DnaE DNA polymerase III (alpha))

Samisti12_81

Samisti12_82
(MazG nucleotide pyrophosphohydrolase)

Samisti12_83
(RecA DNA recombinase)

Samisti12_84

Samisti12_85

Samisti12_86

Samisti12_87

Samisti12_88
(RecB exonuclease/helicase)

Samisti12_89

Samisti12_90
(resolvase, RuvC-like)

Samisti12_91

Samisti12_92

Samisti12_93

Samisti12_94

Samisti12_95

Samisti12_96
(terminase, large subunit)

Samisti12_97
(HNH endonuclease)

Samisti12_98

Samisti12_102

Samisti12_103

Samisti12_106
(nucleotidyl transferase)

Samisti12_107
(FtsK DNA translocase)

Samisti12_108

Samisti12_110

Samisti12_111

Samisti12_113

Samisti12_115

Samisti12_116

Samisti12_117
(hydrolase)

Samisti12_118

Samisti12_120

Samisti12_121

Samisti12_123

Samisti12_124

Samisti12_125

Samisti12_126
(Ro RNA binding protein)

Samisti12_127

Samisti12_128

Samisti12_129

Samisti12_130

Samisti12_131

Samisti12_132

Samisti12_133

Samisti12_135

Samisti12_139

Samisti12_143

Samisti12_144

Samisti12_145

Samisti12_148

Samisti12_149

Samisti12_151

Samisti12_152

Samisti12_154

Samisti12_155

Samisti12_156

Samisti12_158

Samisti12_164

Samisti12_167

Samisti12_168

Samisti12_169

Samisti12_174

Samisti12_175

Samisti12_179

Samisti12_181

Samisti12_182
(exonuclease)

Samisti12_183

Samisti12_185

Samisti12_186
(hydrolase)

Samisti12_187

Samisti12_188

Samisti12_189

Samisti12_190

Samisti12_192

Samisti12_193

Samisti12_194

Samisti12_195

Samisti12_196

Samisti12_197
(RNA ligase)

Samisti12_198

Samisti12_199

Samisti12_200
(polynucleotide kinase)

Samisti12_201

Samisti12_202

Samisti12_204

Samisti12_205

Samisti12_207

Samisti12_208

Samisti12_210

Samisti12_212

Samisti12_213

Samisti12_214

Samisti12_215

Samisti12_216

Samisti12_217

Samisti12_218

Samisti12_219

Samisti12_220

Samisti12_221
(deoxycytidylate deaminase)

Samisti12_222

Samisti12_223

Samisti12_224
(phosphoesterase)

Samisti12_225

Samisti12_226

Samisti12_227
(WhiB family transcription factor)

Samisti12_228

Samisti12_229

Samisti12_230

Samisti12_231

Samisti12_232

Samisti12_233

Samisti12_234

Samisti12_235

Samisti12_237

Samisti12_238

Samisti12_239

Samisti12_240

Samisti12_241

Samisti12_242

Samisti12_243
(thioredoxin)

Samisti12_244

Samisti12_245

Samisti12_246

Samisti12_247

Samisti12_248

Samisti12_249

Samisti12_250

Samisti12_251

Samisti12_252

Samisti12_253

Samisti12_254

Samisti12_255

Samisti12_256

Samisti12_257

Samisti12_258
(Lsr2 DNA bridging protein)

Samisti12_259

Samisti12_260

Samisti12_261

Samisti12_262

Samisti12_263

Samisti12_264

Samisti12_265

Samisti12_266

Samisti12_267

Samisti12_268

Samisti12_269

Samisti12_270

Samisti12_271

Samisti12_272
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF347639
Refseq NumberNone yet
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload