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Mycobacterium phage YungJamal
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Detailed Information for Phage YungJamal
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEddie Pacey
Year Found2012
Location FoundNorth Allegheny, Pittsburgh, PA United States
Finding InstitutionNorth Allegheny High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.575301 N, 80.028883 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 31, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage295
Sanger Finishing Reactions15
Genome length (bp)70214
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceGTCT
GC Content65.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterO
Subcluster--
Other Cluster Members
MorphotypeSiphoviridae
Final annotation complete?No
Number of Genes124
Has been Phamerated?Yes
Gene List

Click to View

YungJamal_1

YungJamal_2

YungJamal_3

YungJamal_4

YungJamal_5

YungJamal_6
(DNA methylase)

YungJamal_7
(DNA methylase)

YungJamal_8

YungJamal_9

YungJamal_10

YungJamal_11
(Endo VII)

YungJamal_12

YungJamal_13

YungJamal_14

YungJamal_15

YungJamal_16

YungJamal_17

YungJamal_18

YungJamal_19

YungJamal_20

YungJamal_21
(DNA primase/polymerase)

YungJamal_22

YungJamal_23

YungJamal_24

YungJamal_25

YungJamal_26

YungJamal_27

YungJamal_28

YungJamal_29

YungJamal_30
(HNH endonuclease)

YungJamal_31

YungJamal_32

YungJamal_33
(terminase large subunit)

YungJamal_34
(HNH endonuclease)

YungJamal_35
(portal protein)

YungJamal_36
(O-methyltransferase)

YungJamal_37

YungJamal_38
(glycosyltransferase)

YungJamal_39
(glycosyltransferase)

YungJamal_40
(head maturation protease)

YungJamal_41

YungJamal_42
(capsid protein)

YungJamal_43

YungJamal_44

YungJamal_45

YungJamal_46

YungJamal_47

YungJamal_48

YungJamal_49

YungJamal_50
(major tail protein)

YungJamal_51

YungJamal_52

YungJamal_53

YungJamal_54
(HTH transcription regulator)

YungJamal_55
(tail assembly chaperone)

YungJamal_56
(tail assembly chaperone)

YungJamal_57

YungJamal_58
(tapemeasure protein)

YungJamal_59
(minor tail protein)

YungJamal_60

YungJamal_61
(minor tail protein)

YungJamal_62
(minor tail protein)

YungJamal_63
(minor tail protein)

YungJamal_64
(minor tail protein)

YungJamal_65
(minor tail protein)

YungJamal_66
(minor tail protein)

YungJamal_67

YungJamal_68

YungJamal_69

YungJamal_70

YungJamal_71
(lysin A)

YungJamal_72
(lysin B)

YungJamal_73
(holin)

YungJamal_74

YungJamal_75

YungJamal_76

YungJamal_77

YungJamal_78
(HTH DNA binding domain protein)

YungJamal_79

YungJamal_80

YungJamal_81

YungJamal_82

YungJamal_83

YungJamal_84

YungJamal_85

YungJamal_86
(DNA polymerase III beta subunit)

YungJamal_87

YungJamal_88
(Ku-like protein)

YungJamal_89

YungJamal_90

YungJamal_91
(ParB-like domain protein)

YungJamal_92

YungJamal_93

YungJamal_94

YungJamal_95

YungJamal_96

YungJamal_97
(AAA ATPase)

YungJamal_98

YungJamal_99

YungJamal_100

YungJamal_101

YungJamal_102

YungJamal_103

YungJamal_104

YungJamal_105

YungJamal_106

YungJamal_107

YungJamal_108

YungJamal_109

YungJamal_110

YungJamal_111

YungJamal_112

YungJamal_113

YungJamal_114

YungJamal_115

YungJamal_116

YungJamal_117

YungJamal_118

YungJamal_119

YungJamal_120

YungJamal_121

YungJamal_122

YungJamal_123

YungJamal_124

Submitted Annotation in DNA Master FormatDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKJ829260
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
EM PictureDownload