Detailed Information for Phage Alleb |
Discovery Information |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Mackenzie Batt |
Year Found | 2017 |
Location Found | Lincoln, NE USA |
Finding Institution | Nebraska Wesleyan University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 40.807982 N, 96.595328 W Map |
Naming Notes | Alleb is my dog Bella's name spelled backwards. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 25, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Genome length (bp) | 62684 |
Character of genome ends | Unknown |
Direct Terminal Repeat Length | 3205 bp |
GC Content | 64.5% |
Sequencing Notes | at position 30354 bp approximately 45% of read contain an A instead of consensus G |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | ED |
Subcluster | ED1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Wisconsin-River Falls |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 115 |
Number of tRNAs | 4 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK376963 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
68 |
Pitt Freezer Box Grid# |
A6 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |