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Microbacterium phage Hubbs
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Detailed Information for Phage Hubbs
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Former namesRoli
Found ByCass Hubble
Year Found2018
Location FoundRiver Falls, WI USA
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature28°C
GPS Coordinates44.9844 N, 92.7544 W Map
Discovery NotesThe soil was moist with leaves, grass and vegetables. The depth was 30mm​

The temperature was 71 F with sunny skies and no breeze​
Naming NotesI liked the name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 19, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage145
Genome length (bp)63862
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length3463 bp
GC Content62.8%
Sequencing NotesThis phage was sequenced as part of a DOGEMS sample, then the sequence was matched to the lysate by PCR.
Fasta file available?Yes: Download fasta file
Characterization
ClusterED
SubclusterED1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusIn GenBank
Plaque NotesThe plaques were very small and cloudy. A few at the beginning had halos but by the end turned into cloudy small spots. The plaques were uniform in size.
Has been Phamerated?Yes
Gene List

Click to View

Hubbs_1

Hubbs_2

Hubbs_3

Hubbs_4

Hubbs_5

Hubbs_6

Hubbs_7
(membrane protein)

Hubbs_8

Hubbs_9

Hubbs_10

Hubbs_11

Hubbs_12

Hubbs_13

Hubbs_14

Hubbs_15

Hubbs_16
(membrane protein)

Hubbs_17

Hubbs_18

Hubbs_19

Hubbs_20

Hubbs_21

Hubbs_22

Hubbs_23

Hubbs_24

Hubbs_25

Hubbs_26

Hubbs_27

Hubbs_28

Hubbs_29

Hubbs_30
(thioredoxin)

Hubbs_31
(exonuclease)

Hubbs_32

Hubbs_33
(terminase)

Hubbs_34
(portal protein)

Hubbs_35
(HNH endonuclease)

Hubbs_36
(capsid maturation protease)

Hubbs_37

Hubbs_38
(major capsid protein)

Hubbs_39

Hubbs_40
(minor tail protein)

Hubbs_41

Hubbs_42
(hydrolase)

Hubbs_43
(head-to-tail stopper)

Hubbs_44

Hubbs_45
(tail terminator)

Hubbs_46

Hubbs_47

Hubbs_48

Hubbs_49
(tail assembly chaperone)

Hubbs_50
(tail assembly chaperone)

Hubbs_51
(tape measure protein)

Hubbs_52

Hubbs_53
(minor tail protein)

Hubbs_54

Hubbs_55

Hubbs_56

Hubbs_57
(lysin A)

Hubbs_58
(membrane proteib)

Hubbs_59
(membrane protein)

Hubbs_60
(membrane protein)

Hubbs_61
(RuvC-like resolvase)

Hubbs_62

Hubbs_63

Hubbs_64

Hubbs_65

Hubbs_66
(DNA primase)

Hubbs_67

Hubbs_68

Hubbs_69

Hubbs_70
(exonuclease)

Hubbs_71

Hubbs_72
(exonuclease)

Hubbs_73

Hubbs_74

Hubbs_75

Hubbs_76
(RNA ligase)

Hubbs_77
(polynucleotide kinase)

Hubbs_78
(DNA helicase)

Hubbs_79

Hubbs_80

Hubbs_81

Hubbs_82

Hubbs_83

Hubbs_84

Hubbs_85

Hubbs_86

Hubbs_87

Hubbs_88

Hubbs_89

Hubbs_90

Hubbs_91

Hubbs_92

Hubbs_93

Hubbs_94

Hubbs_95
(helix-tuen-helix DNA binding domain)

Hubbs_96

Hubbs_97

Hubbs_98

Hubbs_99

Hubbs_100

Hubbs_101

Hubbs_102

Hubbs_103

Hubbs_104

Hubbs_105

Hubbs_106

Hubbs_107

Hubbs_108

Hubbs_109

Hubbs_110

Hubbs_111

Hubbs_112

Hubbs_113

Hubbs_114

Hubbs_115

Hubbs_116

Hubbs_117

Hubbs_118

Hubbs_119

Hubbs_120

Hubbs_121

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN908690
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 87
Pitt Freezer Box Grid# G12
Available Files
GenBank File for PhameratorDownload