Microbacterium phage Hortus1
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Detailed Information for Phage Hortus1
Discovery Information
Isolation HostMicrobacterium paraoxydans NWU1
Found ByAustin Reed
Year Found2016
Location FoundLincoln, NE USA
Finding InstitutionNebraska Wesleyan University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.735331 N, 96.612074 W Map
Discovery NotesThe bacteriophage was obtained from soil in a garden. I dug approximately one inch in depth and then collected.
Naming NotesThe phage was named Hortus1 because in Latin, Hortus means garden, which is where the phage was found.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1154
Genome length (bp)63119
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length3159 bp
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterED
SubclusterED1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionNebraska Wesleyan University
Annotation StatusIn GenBank
Plaque NotesClear plaques that are relatively large in size.
Has been Phamerated?Yes
Gene List

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Hortus1_1

Hortus1_2

Hortus1_3

Hortus1_4

Hortus1_5

Hortus1_6

Hortus1_7

Hortus1_8

Hortus1_9

Hortus1_10

Hortus1_11

Hortus1_12

Hortus1_13

Hortus1_14

Hortus1_15

Hortus1_16

Hortus1_17

Hortus1_18

Hortus1_22

Hortus1_23

Hortus1_24

Hortus1_25

Hortus1_26

Hortus1_27

Hortus1_28
(thioredoxin)

Hortus1_29
(exonuclease)

Hortus1_30

Hortus1_31
(terminase)

Hortus1_32
(portal protein)

Hortus1_33
(MuF-like minor capsid protein)

Hortus1_34

Hortus1_35
(major capsid protein)

Hortus1_36

Hortus1_37

Hortus1_38
(metallophosphoesterase)

Hortus1_39

Hortus1_40
(head-to-tail stopper)

Hortus1_41

Hortus1_42
(tail terminator)

Hortus1_43

Hortus1_44

Hortus1_45

Hortus1_46
(tail assembly chaperone)

Hortus1_47
(tail assembly chaperone)

Hortus1_48
(tape measure protein)

Hortus1_49

Hortus1_50
(minor tail protein)

Hortus1_51

Hortus1_52

Hortus1_53

Hortus1_54
(lysin A)

Hortus1_55

Hortus1_56

Hortus1_57
(RuvC-like resolvase)

Hortus1_58

Hortus1_59

Hortus1_60

Hortus1_61

Hortus1_62

Hortus1_63
(DNA primase)

Hortus1_65

Hortus1_66

Hortus1_67

Hortus1_68
(exonuclease)

Hortus1_69

Hortus1_70
(exonuclease)

Hortus1_71

Hortus1_72

Hortus1_73

Hortus1_74
(RNA ligase)

Hortus1_75

Hortus1_76
(polynucleotide kinase)

Hortus1_77
(DNA helicase)

Hortus1_78

Hortus1_79

Hortus1_80

Hortus1_81

Hortus1_82

Hortus1_83

Hortus1_84

Hortus1_85

Hortus1_86

Hortus1_87

Hortus1_88

Hortus1_89

Hortus1_90

Hortus1_91

Hortus1_92

Hortus1_93

Hortus1_94

Hortus1_95

Hortus1_96

Hortus1_97

Hortus1_98
(helix-turn-helix DNA binding domain protein)

Hortus1_99

Hortus1_100

Hortus1_101

Hortus1_102

Hortus1_103

Hortus1_104

Hortus1_105

Hortus1_106

Hortus1_107

Hortus1_108

Hortus1_109

Hortus1_110

Hortus1_111

Hortus1_112

Hortus1_113

Hortus1_114

Hortus1_115

Hortus1_116

Hortus1_117

Hortus1_118

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH271300
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 8.5 x 10^9
Pitt Freezer Box# 45
Pitt Freezer Box Grid# E6
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload