| Detailed Information for Phage Amabiko |
| Discovery Information |
| Isolation Host | Streptomyces scabiei RL-34 |
| Found By | Kirsten Tran & Heba Bakry |
| Year Found | 2022 |
| Location Found | Baltimore, MD United States |
| Finding Institution | University of Maryland, Baltimore County |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 39.25623 N, 76.71286 W Map |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 24, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 238 |
| Genome length (bp) | 131414 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 12588 bp |
| GC Content | 49.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BE |
| Subcluster | BE2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Arizona State University |
| Annotation Status | In GenBank |
| Plaque Notes | ~2 mm, clear, symmetrical and circular after 24 hours at 30C on S. scabiei on NA+ |
| Morphotype | Siphoviridae |
| Number of Genes | 245 |
| Number of tRNAs | 45 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP358748 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
151 |
| Pitt Freezer Box Grid# |
A4 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
