Detailed Information for Phage Amabiko |
Discovery Information |
Isolation Host | Streptomyces scabiei RL-34 |
Found By | Kirsten Tran & Heba Bakry |
Year Found | 2022 |
Location Found | Baltimore, MD United States |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 39.25623 N, 76.71286 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 24, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 238 |
Genome length (bp) | 131414 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 12588 bp |
GC Content | 49.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BE |
Subcluster | BE2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Arizona State University |
Annotation Status | In GenBank |
Plaque Notes | ~2 mm, clear, symmetrical and circular after 24 hours at 30C on S. scabiei on NA+ |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP358748 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
151 |
Pitt Freezer Box Grid# |
A4 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |