Detailed Information for Phage Amelia |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Emily Kukan |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 40.446667 N, 79.954167 W Map |
Naming Notes | This phage was named after the better Dr. Shepherd, Amelia Shepherd. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 2, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1405 |
Genome length (bp) | 38128 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | GAGTTGCCGGCA |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AS |
Subcluster | AS2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Number of Genes | 71 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN234214 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
8 |
Pitt Freezer Box Grid# |
D10 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |