Arthrobacter phage Amelia
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Detailed Information for Phage Amelia
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByEmily Kukan
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.446667 N, 79.954167 W Map
Naming NotesThis phage was named after the better Dr. Shepherd, Amelia Shepherd.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 2, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1405
Genome length (bp)38128
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGCA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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Amelia_1

Amelia_2

Amelia_3

Amelia_4
(terminase)

Amelia_5
(RNA binding protein)

Amelia_6
(portal protein)

Amelia_7
(capsid maturation protease)

Amelia_8
(major capsid protein)

Amelia_9

Amelia_10
(head-to-tail adaptor)

Amelia_11
(head-to-tail stopper)

Amelia_12

Amelia_13
(tail terminator)

Amelia_14
(major tail protein)

Amelia_15
(tail assembly chaperone)

Amelia_16
(tail assembly chaperone)

Amelia_17
(tape measure protein)

Amelia_18
(minor tail protein)

Amelia_19
(minor tail protein)

Amelia_20
(minor tail protein)

Amelia_21
(minor tail protein)

Amelia_22

Amelia_23

Amelia_24
(endolysin)

Amelia_25

Amelia_26

Amelia_27
(helix-turn-helix DNA binding domain protein)

Amelia_28

Amelia_29

Amelia_30

Amelia_31

Amelia_32
(HNH endonuclease)

Amelia_33
(helix-turn-helix DNA binding protein)

Amelia_34

Amelia_35

Amelia_36
(tyrosine integrase)

Amelia_37
(immunity repressor)

Amelia_38
(helix-turn-helix DNA binding domain protein)

Amelia_39
(helix-turn-helix DNA binding domain protein)

Amelia_40
(RecE-like exonuclease)

Amelia_41
(RecT-like ss DNA binding protein)

Amelia_42
(helix-turn-helix DNA binding domain protein)

Amelia_43
(RusA-like resolvase)

Amelia_44
(helix-turn-helix DNA binding domain protein)

Amelia_45
(DNA methylase)

Amelia_46
(DNA methylase)

Amelia_47

Amelia_48

Amelia_49

Amelia_50

Amelia_51

Amelia_52

Amelia_53
(deoxycytidylate deaminase)

Amelia_54

Amelia_55
(endonuclease)

Amelia_56

Amelia_57

Amelia_58

Amelia_59

Amelia_60

Amelia_61

Amelia_62

Amelia_63

Amelia_64

Amelia_65

Amelia_66

Amelia_67

Amelia_68

Amelia_69

Amelia_70
(MerR-like helix-turn-helix DNA binding domain protein)

Amelia_71
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234214
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 8
Pitt Freezer Box Grid# D10
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload